| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0476 |
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| Symbol | |
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| ID | 4602731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 586362 |
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| End bp | 586952 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639779812 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_926356 |
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| Protein GI | 119773616 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.146337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATACCA AAACCCAAGA CACCCGGCAA CACATACTCG ACATAGGCTA CCAACTGGTG
GTCAACAAAG GCTTTGCCGG TGTGGGCCTG TCGGAACTGC TGAAAACCGC CGAGGTGCCC
AAGGGCTCCT TCTATCACTA CTTCAAGTCC AAGGAGCAGT TTGGCGAAGC CCTTATCCAG
GCATATTTCA GCGAGTACCT GCGTCAACTG AACCAGTTGC TGGAGACGGC TCCGGGTAAC
CAGTATCAAA AACTGATGCA CTACTGGCAG CATTGGAGCG AGCAAAACAG CTGTCAGGGT
CAGGCTGGAA AGTGCCTGGT AGTCAAGCTT GCCGGTGAGG TATCAGACTT ATCCGAGCCC
ATGCGCCTGG CCCTCCTCAC TGGCACCAAT CGCATCATAG AGCGGGTGGC CGAGTGTCTT
GAAAAGGCCC GGACTGCTGG CGAGATAAGC ATCAGTAATA GCCGCCAGAC AGCAGAGCAG
CTGTACAACC TGTGGATTGG CGCCAGTTTG CTGAACAAGA TACGTTTGGA CGATGCCAGC
CTGCAGCAGG CACTGCTGAC CACCAGACAG GTATTACAGC CAACGGCCTG A
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| Protein sequence | MNTKTQDTRQ HILDIGYQLV VNKGFAGVGL SELLKTAEVP KGSFYHYFKS KEQFGEALIQ
AYFSEYLRQL NQLLETAPGN QYQKLMHYWQ HWSEQNSCQG QAGKCLVVKL AGEVSDLSEP
MRLALLTGTN RIIERVAECL EKARTAGEIS ISNSRQTAEQ LYNLWIGASL LNKIRLDDAS
LQQALLTTRQ VLQPTA
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