| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0474 |
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| Symbol | |
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| ID | 4602729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 583184 |
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| End bp | 584632 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639779810 |
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| Product | TldD protein |
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| Protein accession | YP_926354 |
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| Protein GI | 119773614 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.862683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.185697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTTT TAACCCAAGT TGAACAGAGC CTGCTCGCCA ACAACCTGAG CCTGGATAAC
CTGGCCGAGT ACCTCAAACT CATCCACAAC CATAATGTGG ACTTTTCTGA TCTCTATTTT
CAGGGCAGCA GGCATGAAAC CTGGGTATTG GAAGACGGCA TCATCAAAGA AGGCTCCTTC
CACATCGAAC GCGGTGTGGG AGTGCGTGCC ATCAGTGGTG AGAAAACCGG ATTCGCCTAC
GCCGATGAAA TCACCCCGGC TGCCCTCGAA GCGGCAGCGC TGGCAGCACG CGGTATAGCG
CAGGTCGGCA GCGATTATCA GGTCAAAGCC TGGAAACGTC AGGGCGCCAA GACCCTGTAT
GACAGCGCCG ATCCTATTGC CGCCATGGAA GAAGCCACCA AAATCGCCAT GTTGCGTCAG
GCCGACGCCT ATATCCGCAG CCTCGATTCC CGCATCATCC AGGTGGTGGT AAGCCTCTCT
GCTGTGCACG AAGAAATCCT GGTAGCCGCA AGTGATGGCA CCCTGGCGGC CGACATTCGT
CCGTTGGTGC GGTTCAACTG TTCAGTGATT ATGGAAGAAA ACGGCAAGCG GGAGCGCGGC
GGTGCCGGTG GCGGTGGCCG CCACGATTTT GCCCCCCTCT TTGCCAATGA TGACACCGGC
ATGCCGGTGT GCTTTGCCTT TGCCCGTGAA GCCGTGCGTC AGGCGCAGGT GAACCTTAAC
GCTGTGGACG CGCCTGCCGG TGAAATGCCT GTGGTACTTG GACCCGGCTG GCCGGGCGTG
CTGCTGCACG AAGCCGTTGG CCATGGTCTG GAAGGCGACT TTAACCGCAA AGGATCCAGC
GCCTTCAGTG GCAAGGTGGG TCAGCAGGTA GCTTCCAAGC TGGTGACAGT GGTGGACGAC
GGCACCCTGC CGGGCCGCCG CGGCTCCCTC ACCATCGATG ATGAAGGCGT ACCGGCCCAC
CGAACCGTAT TGATTGAAAA CGGTATCCTG AAAGGCTATA TGCAAGACAA GCTCAACGCC
CGTTTGATGG GAGTGGCGCC CACAGGTAAC GGTCGCCGTG AGTCCTACGC CCATCTGCCT
ATGCCACGTA TGACCAACAC CTATATGACA GCCGGTAACG ACAACCCAGC CGATATTATC
AAGTCGGTGG AAAAGGGCAT TTACGCACCT AATTTCGGCG GTGGTCAGGT GGACATCACG
TCGGGCAAAT TCGTGTTCTC GGCCTCTGAA GCCTACCTGA TTGAAAAGGG CGAGATCACC
CGCGCCATCA AGGGGGCGAC CCTGATTGGC AACGGCCCTG AGGCCATGAG TCAAATCTCT
ATGGTGGGTA ACGATCTCGA ACTCGACAAG GGGGTGGGAG TGTGTGGTAA AGATGGCCAG
AGCGTGCCTG TGGGTGTGGG CCAGCCAACC CTGAGACTCG ATCGCTTAAC TGTGGGCGGC
ACCGCCTGA
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| Protein sequence | MPFLTQVEQS LLANNLSLDN LAEYLKLIHN HNVDFSDLYF QGSRHETWVL EDGIIKEGSF
HIERGVGVRA ISGEKTGFAY ADEITPAALE AAALAARGIA QVGSDYQVKA WKRQGAKTLY
DSADPIAAME EATKIAMLRQ ADAYIRSLDS RIIQVVVSLS AVHEEILVAA SDGTLAADIR
PLVRFNCSVI MEENGKRERG GAGGGGRHDF APLFANDDTG MPVCFAFARE AVRQAQVNLN
AVDAPAGEMP VVLGPGWPGV LLHEAVGHGL EGDFNRKGSS AFSGKVGQQV ASKLVTVVDD
GTLPGRRGSL TIDDEGVPAH RTVLIENGIL KGYMQDKLNA RLMGVAPTGN GRRESYAHLP
MPRMTNTYMT AGNDNPADII KSVEKGIYAP NFGGGQVDIT SGKFVFSASE AYLIEKGEIT
RAIKGATLIG NGPEAMSQIS MVGNDLELDK GVGVCGKDGQ SVPVGVGQPT LRLDRLTVGG
TA
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