| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0469 |
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| Symbol | |
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| ID | 4602724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 575203 |
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| End bp | 575691 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639779805 |
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| Product | rod shape-determining protein MreD |
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| Protein accession | YP_926349 |
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| Protein GI | 119773609 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2891] Cell shape-determining protein |
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| TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.795079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.874412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCTGC AGGCCCCCAA TCGTCGCATC GTGGTCTGGC TAACCCTGTT TGTCGGCTTG
TTGTTTCAAA TCATGCCGCT GCCTGATCTG GTTGCCGCCT GGCGTCCGGA CTGGCTGCTG
CTGGTGCTCA TCTACTGGAC CATGGCTTTG CCCCATAGAT ACAACATCCT GACCGCCTGG
ATTTTGGGGG TGGTATTGGA TGTATTGCTG GGCGCGACCC TCGGCGTCAG GGCGCTGGCT
TTTTCATTGG TGATTTACGT GGTGGCACTG CATTTTCAGC GTATGCGTAA CTTCACTATC
TGGCAGCAGT CTTTGTTGGT TGCATCCCTG GTAGGGGTGT TTCATCTGGT GGTGTACTGG
CTGCAGTACG TGCTGACCAA GGCCACTTAC TCCCACGCCA TCTTCTGGCC TGTGTTGTCC
AGCCTCGTTA TCTGGCCCTG GGTGTTCTGG TTCCTGCGTC GGGTGCGTCG CCGTTATAAA
GTGAGATAA
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| Protein sequence | MSLQAPNRRI VVWLTLFVGL LFQIMPLPDL VAAWRPDWLL LVLIYWTMAL PHRYNILTAW
ILGVVLDVLL GATLGVRALA FSLVIYVVAL HFQRMRNFTI WQQSLLVASL VGVFHLVVYW
LQYVLTKATY SHAIFWPVLS SLVIWPWVFW FLRRVRRRYK VR
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