| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0458 |
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| Symbol | |
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| ID | 4602713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 565019 |
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| End bp | 566239 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639779794 |
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| Product | MSHA biogenesis protein MshG |
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| Protein accession | YP_926338 |
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| Protein GI | 119773598 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.954592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTGT ACAAGTATCG GGGGCGAAAC GCCCAGGGAC AGCAGGTAAC AGGAGAGCTT
GATGCTGCCT CCGAGAATGC CGCCGCCGAT CAGTTGCTGT CGCGGGCGGT TATCCCGCTG
GAATTTCGCG AAACCAAGCC CCGTGGCGAA GGCGTAAGCG TATCCAGCTT GTTTCGTCGC
AGGGTCAGTT TGGAAGAGCT GCAGATTTTT ACCCGGCAGA TGTATTCACT GACCCGCTCG
GGGATCCCGA TTCTCAGAGC CATTGCGGGG CTTAGCGAAA CCACCCATTC TCAGCAAATG
AAGCAGGCGC TGGATGATAT TTCTGTGCAG CTGACTGCGG GCAGGCCTCT GTCATCGGCG
ATGAACCATC ATCCCGAGGT GTTTGATGCC CTGTTTGTTT CCATGGTGCA TGTGGGCGAA
AACACCGGTA AGTTGGAAGA CGTCTTTTTG CAGTTGTCGG GTTATCTTGA GCGCGAGCAG
GAAACCCGTC GCCGCATCAA GTCAGCCGTC CGTTACCCCA CATTTGTGCT GATTGCTATC
TCTCTGGCCA TGGTGATTTT AAACATTATG GTGATCCCAA AGTTTGCCGA CATGTTTTCC
CGGTTTGGCG CCGAGTTGCC CTGGGCGACC CGGATTCTGA TTGCCACATC CAATTTTTTC
GTCAACTACT GGTGGCTGCT GGCACTGCTC GTGGTGGGAC TGATTGGTGG TCTCGCCTAC
TGGCACAAAA CAGAGCAAGG AGAAAAAAAA TGGGACCAGT GGAAGCTGCA TATGCCGGCG
GTGGGTTCCA TTATTGAACG TTCTACCCTG TCTCGCTATT GCCGCAGCTT TGCCATGATG
ATGGGCGCCG GTGTTCCCAT GACACAGGCT CTGAGCTTGG TTGCCGATGC TGTGGACAAC
GCTTACATGC ACGACAAGAT AGTGGCCATG CGCCGCGGGA TTGAGTCCGG CGAATCCATG
TTGCGGGTGT CTAACCACAG TAAACTCTTT ACCCCGCTGG TGCTGCAGAT GGTGGCCGTG
GGGGAAGAAA CCGGACAGCT GGAACAGCTC CTTAACGATG CGGCCGATTT TTACGAAGGT
GAAGTGGACT ACGACCTGAA AAATCTCACC GCCAAGCTTG AGCCCATACT TATCGGCATA
GTGGCTGGCA TTGTGCTCAT TCTGGCACTG GGTATCTACC TGCCCATGTG GGACATGCTC
AATGTGGTCA AGGGAGGCTG A
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| Protein sequence | MPVYKYRGRN AQGQQVTGEL DAASENAAAD QLLSRAVIPL EFRETKPRGE GVSVSSLFRR
RVSLEELQIF TRQMYSLTRS GIPILRAIAG LSETTHSQQM KQALDDISVQ LTAGRPLSSA
MNHHPEVFDA LFVSMVHVGE NTGKLEDVFL QLSGYLEREQ ETRRRIKSAV RYPTFVLIAI
SLAMVILNIM VIPKFADMFS RFGAELPWAT RILIATSNFF VNYWWLLALL VVGLIGGLAY
WHKTEQGEKK WDQWKLHMPA VGSIIERSTL SRYCRSFAMM MGAGVPMTQA LSLVADAVDN
AYMHDKIVAM RRGIESGESM LRVSNHSKLF TPLVLQMVAV GEETGQLEQL LNDAADFYEG
EVDYDLKNLT AKLEPILIGI VAGIVLILAL GIYLPMWDML NVVKGG
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