| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0446 |
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| Symbol | |
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| ID | 4602701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 552004 |
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| End bp | 552729 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779782 |
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| Product | hypothetical protein |
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| Protein accession | YP_926326 |
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| Protein GI | 119773586 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | [TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGAC TTTTCATCCT TGCCTTGCTG TTGATGGTTC AGGCCCTGAC GCCTGCACAG
GCGCGTTTAT CCCATGTCAG TATCAATAAA AGCCAATTCA CTTTGGGCGA ATACCCGCGT
CTGCGAGTCA ATATTGTGTC TGAGCGCAGT GACCTGTCGC GGCTGGAGTT TGTGGTGCGC
CAGGGTACCC GGGAAGAAAA GCTCATGGTT GAGCCCCTGA ACAACTTTAT GTTGTTGCTG
TTTGGCGTCG ACAATGTGAC AGACGCCAAT GCCGAACTGG TGGTGCGCGA ATACGTGGTC
AATCAGTGGC AGGAATATAA GGTTATCCCG CTGTTTGGTG GCACGGAGCG AGTCGCGAAA
GCACCGAGCG CGTCCCCGAG AAAGGCCGCC GAGCTGTTGG CTCCCGAGTC CGTACCTGTG
GCGAAACCCA CTCCCGTGCA AATGTCGCTT GCCAGCGCGG CCAACGACAG CGGTGGCTGC
GCCGTTGAGT ACCAGCCAGG GGAGACCCTC TGGCGCATTG CCAGTCGTTA TGCGCCCCGC
TGGAATACCA ACGTATACAG CACCATGATG GCATTGTTTG ATGCCAATCC CCGCGCCTTT
ACCAAGGGCA AAATCAGTGG CCTCAAGCAA GATGCTAAGC TGGAGTGCCC ATCACCGGCG
CTGCTGGGGC GTTATCCGGA TACCCGAGAG GCGAGACGCA TTTTTGAAGC CAAAAGCCTG
GAGTGA
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| Protein sequence | MTRLFILALL LMVQALTPAQ ARLSHVSINK SQFTLGEYPR LRVNIVSERS DLSRLEFVVR
QGTREEKLMV EPLNNFMLLL FGVDNVTDAN AELVVREYVV NQWQEYKVIP LFGGTERVAK
APSASPRKAA ELLAPESVPV AKPTPVQMSL ASAANDSGGC AVEYQPGETL WRIASRYAPR
WNTNVYSTMM ALFDANPRAF TKGKISGLKQ DAKLECPSPA LLGRYPDTRE ARRIFEAKSL
E
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