| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0438 |
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| Symbol | |
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| ID | 4602693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 536704 |
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| End bp | 538971 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639779774 |
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| Product | signal transduction histidine kinase-like protein |
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| Protein accession | YP_926318 |
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| Protein GI | 119773578 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.128515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGT CATCGGCAGT ACCCCACCCT GAAGGACGCC GCTCGCGGTT GGGTGGGATG
CCATGGCTGT CGGCGCTCTC GTCCTGCGTG CCGGCAATGA TGCTGGCAAT GATGATGGCC
TTGTTCCTGT CTGGCTGTGG CGAAAATCAG GCCGGGGCAG CTGCCAGCAC TGAGATAAGC
GGTGATGCGA GAGTGCAGGA GCTACTCACG CTCGCTGCCG CTTCCCGCAA TGACGATCCC
CACAAAACCA TCGACTACAG CAGCCAGGCA TTAACGCTGC TGAAAGAAAT ACCCGAACCC
GCCTCGGAAG TGATGGCGCT CAGCAACCTC GCCTGGGCCA AGATGTTATT GGGAGACTTT
ACCGAAGCCG CGCAATACGG CGAGGCCGCA TTAACGCTGG CGGAGAATCA ACACCAGCCC
GAGATGCTGG TGGTGCCCCT CAATGTGACA GGCCTTATTT ACTGGCGTCA GAGTCAGCTG
GACAAGGCGC TGACCTATTA TCAGCGGGCA CTGGAGGTGG CCAAAGGACT CAATAAGCGC
TCGTTTGAGG CGACCACCTA TAACAATATG GGGCTTATCC ACAGCGATAA GGCGGAGTAT
CAACTGGCGC TGGAATGTTT TACCCGGGCG CGGGACATAC ACCAGGGGCT GGGGGACGAG
CGGCCTTTGG CAACGGCGCT GAACAATATT GCCGGTATTC ATGCCACCCT CGGAGATTAT
GGTGAGGCGC TGGCCAATCA ACAGGCATCG CTGCGGATCC GCGAAAAGTT GGATGATAAG
CCCGGCGTTG CCGAGTTGCA TCACAATATG GGCATTACCT ATGAGCAGAT AGGGGATTTG
AAGGAGTCCA TGCTTCAGCT GCAACAGGGG CTGAGAGGAT TTGAGGCGCT GGGGGATAAA
ACCGGCATGG CGCAGGCCCT GACAGCCTTG GGTATGGTCA ATCAGAAACT GAAAAATGAC
GTCGATGCCA GGATCTCCAT GGAGCAGGCA CTTGCCTACG GAGAAGAGCT TAATGATGGC
AATATCACGG CCACAGCCCT GATGAGCCTG GGTAAGCTGG CGTTGGCCAT GGGGGATGCT
CAGGGAGCAA GGCGCTATCT GGAGCGCGGG CTGGCCATTG CCGATCGCCT GGGACTGGTC
GCCTTGCAGG CTCAGGGGCG ACTGCGACTT GCGGATTATT TTCTGGTCAC CAGCGAGGTG
GATGTGGCGC GGGAGAGGGC GCTGCAGGCA CAGCAATTGG CTCTGACCAG CGGCGATCGC
AGTCTGCTGA GGGATACCTA TGAGATCCTT TCTCAAATCT ATGAGAGAAA AGGGGATTAT
CAACAGGCAC TTGCCAGCCA CAAAGAATTC AAAAGCATTA ATGATGCCCT TTTCAATGCC
AGTTCACAGG ATCGCCTTGC CTGGCTTCGC AGCTCCTTTG AGGCAGAAAA ACGCCAGCGT
CAGATAACCG AGCTCGAGAG CGAAAAAGCG TTGCAGGCGG AGGTGATAAA ACAGCAGCGG
GTGGCCCGTA ACCTCTGGAT TTTGGCGTTG ATTGCGGTTG CAGCCATCAT GCTGCTGCTC
TACGGTCGGC ACAGTCAGGC CCGGGTTAAT CAGGCACTGC AGCGCTCTAT TCAGATGCAG
CGGGACTTGA TGCAGGCGGT GGCCCATGAA TTCAGGGCAC CGTTGGCGAG GGTACAACTG
GCTTTCGATA TGCTGATGGA AGCCGATGCC AAAGAGCAGC CTCAGTTGGA AGACAGGGTG
CTGCGTGGGC TCGAAGAGCT GGACGAACTT ATCCGCGAAA TCGTCAAACT TATCAAAGCA
GAAGGCAGCC CGCGCCGCGC GCCGAGTGAA TCTCTGTCGT TGGCGCCCCT GCTGCAAACC
CTGGTAGCAC GCCAGCATCA GCTGTTCCCC GAAAAGCATC TTGAATTGGC GGCAATCGAT
GAGGACTTAC GGCTCACCGC CAGTAAGAAA CATCTGGAGT GGGCCATCAA TAATTTACTC
TCCAACGCCC TGCGCTACAG TCGGGAGCAG GTCCGGGTCA GCTGCCAGCG AGAATCGGAA
CACCTCTGCA TCATTGTGGA TGATGACGGG CCGGGTGTAC CGGCATCTGA GCGGGAGCGT
ATTTTCGAGC CTTTTGTGCG CCTTGATCCC AGTCGTACCC GGGCCACCGG TGGTATTGGC
CTTGGGCTGG CGATTGCCCG CCGGTTGGCG GAAAACGCCC ATGGCCATAT CCGGGTTGGC
GACAGCCCCC TGGGCGGCGC CCGTTTCGAG CTTATCTGGC CCTACTGA
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| Protein sequence | MTQSSAVPHP EGRRSRLGGM PWLSALSSCV PAMMLAMMMA LFLSGCGENQ AGAAASTEIS
GDARVQELLT LAAASRNDDP HKTIDYSSQA LTLLKEIPEP ASEVMALSNL AWAKMLLGDF
TEAAQYGEAA LTLAENQHQP EMLVVPLNVT GLIYWRQSQL DKALTYYQRA LEVAKGLNKR
SFEATTYNNM GLIHSDKAEY QLALECFTRA RDIHQGLGDE RPLATALNNI AGIHATLGDY
GEALANQQAS LRIREKLDDK PGVAELHHNM GITYEQIGDL KESMLQLQQG LRGFEALGDK
TGMAQALTAL GMVNQKLKND VDARISMEQA LAYGEELNDG NITATALMSL GKLALAMGDA
QGARRYLERG LAIADRLGLV ALQAQGRLRL ADYFLVTSEV DVARERALQA QQLALTSGDR
SLLRDTYEIL SQIYERKGDY QQALASHKEF KSINDALFNA SSQDRLAWLR SSFEAEKRQR
QITELESEKA LQAEVIKQQR VARNLWILAL IAVAAIMLLL YGRHSQARVN QALQRSIQMQ
RDLMQAVAHE FRAPLARVQL AFDMLMEADA KEQPQLEDRV LRGLEELDEL IREIVKLIKA
EGSPRRAPSE SLSLAPLLQT LVARQHQLFP EKHLELAAID EDLRLTASKK HLEWAINNLL
SNALRYSREQ VRVSCQRESE HLCIIVDDDG PGVPASERER IFEPFVRLDP SRTRATGGIG
LGLAIARRLA ENAHGHIRVG DSPLGGARFE LIWPY
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