| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0426 |
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| Symbol | |
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| ID | 4602681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 522664 |
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| End bp | 524145 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779762 |
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| Product | carboxylyase-related protein |
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| Protein accession | YP_926306 |
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| Protein GI | 119773566 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTA AGGATTTACG TAGCTTTATC AGCCACCTCG AAGAGTGCGG TGAGCTTAAG
CGCGTCAGCT ATCCGGTTGA TCCTTATCTT GAAATGACCG AAATCGCCGA CCGCGTATTG
CGTGCCGGTG GCCCGGCGCT GTTGTTCGAA CAGCCAAAAG GCCACAGCAT GCCGGTACTG
GCAAACCTCT TTGGCACACC CAAGCGTGTT GCCATGGCAC TGGGCAAAGA AGACCCGCTG
GCGCTGCGCG ACGTGGGCGA GCTGCTGGCA TTCCTCAAAG AACCTGAGCC ACCCCGCGGC
TTTAAAGATG CCATTGCCAA AATCCCCATG TTCAAGCAAG CGCTGAATAT GCCGCCCAAG
ACGGTGAGCC GAGCCCCCTG TCAGGAAGTG GTGATGACCG GTGATGATGT CGACCTGACC
AAGCTGCCGA TTCAGCATTG CTGGCCAGGC GATGTTGCGC CACTGGTGAC CTGGGGACTA
ACCATCACCA AGGGCCCACG CCAGAAACGT CAGAACCTCG GCATCTACCG TCAGCAGCTT
TTGGGCAAAA ACAAACTCAT CATGCGCTGG CTGTCCCACC GGGGTGGCGC GCTGGATTTC
CGTGATTTTC AGGAAAAGCA TCCAGGCGAG AACTACCCTG TGGTGGTAGC GCTGGGCTCA
GATCCCGTGA CCATACTCGG CGCCGTGACC CCTGTGCCCG ACTCAATGAG CGAATATGCC
TTTGCCGGTC TACTTCGCGG CGAGCGCACC GAAGTGGTCA AGGCCCTCTC CTGCGATCTT
GAAGTACCGG CCACCAGCGA AATCATCCTT GAGGGCTATA TCGCCCCCGG CGAGATGGCC
GAAGAAGGTC CCTACGGCGA CCATACCGGC TATTACAACG AGACCGACAG TTTCCCTGTG
TTTACCGTGA CTCACATCTC CCACAGGAAA GATGCCATCT ACCACAGCAC CTACACTGGC
CGCCCACCGG ATGAGCCAGC CATGCTGGGG GTGGCGCTGA ACGAAGTGTT CGTGCCGATT
TTGCGTAAGC AATATCCTGA AATCGTTGAT TTCTATCTGC CACCCGAAGG TTGTTCCTAT
CGGATGGCGG TGATCTCCAT CCGCAAGCAG TACCCCGGTC ATGCCAAGCG GGTGATGATG
GGTGCCTGGT CGTTCCTGCG CCAGTTTATG TACACCAAAT TTATTGTGGT GGTGGATGAA
GATGTGAATT GCCGTGACTG GCAGGACGTC ATTTGGGCCA TTACCACCCG TATGGACCCC
ACCCGCGATA CCGTGATGAT AGATAACACC CCTATCGATT ATCTCGACTT TGCCTCTCCG
GTGGCGGGCC TTGGCTCCAA GATGGGTCTG GATGCCACCA ACAAGTGGGA AGGTGAGACC
AATCGCGAAT GGGGCACACC CATAGTGATG GACGAGGCGG TAAAACGCCG GGTCGACGAT
ATCTGGGACG AACTCGGTAT CGAACAGTCC CCTACCCTCT AG
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| Protein sequence | MSFKDLRSFI SHLEECGELK RVSYPVDPYL EMTEIADRVL RAGGPALLFE QPKGHSMPVL
ANLFGTPKRV AMALGKEDPL ALRDVGELLA FLKEPEPPRG FKDAIAKIPM FKQALNMPPK
TVSRAPCQEV VMTGDDVDLT KLPIQHCWPG DVAPLVTWGL TITKGPRQKR QNLGIYRQQL
LGKNKLIMRW LSHRGGALDF RDFQEKHPGE NYPVVVALGS DPVTILGAVT PVPDSMSEYA
FAGLLRGERT EVVKALSCDL EVPATSEIIL EGYIAPGEMA EEGPYGDHTG YYNETDSFPV
FTVTHISHRK DAIYHSTYTG RPPDEPAMLG VALNEVFVPI LRKQYPEIVD FYLPPEGCSY
RMAVISIRKQ YPGHAKRVMM GAWSFLRQFM YTKFIVVVDE DVNCRDWQDV IWAITTRMDP
TRDTVMIDNT PIDYLDFASP VAGLGSKMGL DATNKWEGET NREWGTPIVM DEAVKRRVDD
IWDELGIEQS PTL
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