Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0424 |
Symbol | |
ID | 4602679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 520976 |
End bp | 521746 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639779760 |
Product | hypothetical protein |
Protein accession | YP_926304 |
Protein GI | 119773564 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCATT CCTTCAGGCT TTTGCTGCTG CTCCTGACTG TGTTGCCCGG TATCACTGCG CCCCTGGCCC AAGAAAAACT GAATTCATTG TCATTTCTGA CCGAAGAGTA CCCCCCGTTT AACTTCACCC GCGATGGCAA GGTGCAGGGG ATCGCCGTGG ACTTGCTGCT AAGCGCGGCC GCCCTTGAGG GGCAAAGCAT CAGCCACGAA TCCATCCGCG TGTATCCCTG GACCCGGGCT TACGCCATGG CGCTGCGTGG CCATAACATG GTGCTGTTTT CCACCACCCG CACTGCGGAG CGGGAGTCAC TGTTTCATTG GGTCGGCCCC ATAGCCCCCA TGCGGATAGT CTTGATAGCT CCCAGGCAGC GGCATATCCG CATTAACTCG TTGGCAGACT TAAAAGATAA GCGCATTGGT GTGGTCACCA ACGACATTGG GGAAGAAGTG CTGGCCCAAC TTGGCCTGGC GGACCAACTT CAATCCAATG CCAGCGCCGA CTTGCTGCTG AAGATGATGG CCCGTGGACG TATCGATCTT TGGGCCTACG AAGAAACCGT CGCCAAATGG CTCATCAAAG AGTCGGGGAT GAGCTTTGAT GACTTTGAGG TGGTGTATCT GCTCAGAGAT GCCGAGCTCT ACTATGCCTT CAGCCGCGAC GTGCCCGAAG CATTGCGGGT GCAACTGCAG CACGCCCTGG ATACGCTCAA AACACCTCTG GCAGACGCAA CCAGCGGCTG GGCAACCATT ACCCAAAAGT ACCTGCAGTG A
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Protein sequence | MHHSFRLLLL LLTVLPGITA PLAQEKLNSL SFLTEEYPPF NFTRDGKVQG IAVDLLLSAA ALEGQSISHE SIRVYPWTRA YAMALRGHNM VLFSTTRTAE RESLFHWVGP IAPMRIVLIA PRQRHIRINS LADLKDKRIG VVTNDIGEEV LAQLGLADQL QSNASADLLL KMMARGRIDL WAYEETVAKW LIKESGMSFD DFEVVYLLRD AELYYAFSRD VPEALRVQLQ HALDTLKTPL ADATSGWATI TQKYLQ
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