Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0420 |
Symbol | ubiA |
ID | 4602675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 517977 |
End bp | 518849 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639779756 |
Product | 4-hydroxybenzoate octaprenyltransferase |
Protein accession | YP_926300 |
Protein GI | 119773560 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAA TGGCGCAAAA ATGGGATGCC TATTACCGAT TGATGCGACT CGACAGACCC ATAGGCACCA TGCTGCTGCT GTGGCCCTGC CTGATGGCAC TGCTGCTGGC CGCTGACGGA ATGCCCGACT TACGGGTGCT TATCATCTTC ATCATTGGAG TGGTGGTGAT GCGCGCCTGT GGTTGCATCA TCAACGACTA CGCCGACCGC AAGCTCGATT CCCATGTGGC CCGTACCCGG TCGCGGCCTC TGGCCAGCGG TGAGGTCACG GTTGCCGAGG CCCTCACCCT GTTTGTGGTG TTGGGGTTGT TCGCCTTTTC GTTGGTGTTG TTGCTCAACC CTCTGGTGGT GCAGCTCTCG GTGGTGGGCA TTATTCTGAC CATCATTTAT CCCTTTACCA AACGCTGGAC CAATATGCCG CAGATGTTTT TGGGGGTGGT GTGGAGCTGG TCCATTCCCA TGGCCTATGC GGCACAAACC GGTGAAGTGC CTGCCTCTGC CTGGTGGCTC TTTGCGGCCA ACTGGTGCTG GACAGTGGCC TACGACACCA TGTATGCCAT GGTTGACCGG GATGACGACC TCAAGGTGGG GATTAAGTCC ACCGCGATTT TATTTGGTCG CTTTGACCGT GAAATTATAG GCGCGTTTCA GCTTGCGGCC CTGGGCTGCT TTATCGCGGC GGGCTGGAGT GGCGATCGCG GCCTGCTGTA TGGTCTGGGT GTGCTGACCT TTGTGGGCTT TTCTGCCTAT CAACAACGGC TCATTTATGG CCGTGAACGG GGCGATTGTT TCAAGGCTTT TTTAAACAAC AACTGGGCCG GGCTCAGTCT GTTTTTGGCG CTTGGAGCTG ACTACGCCTT TGCAGCGCTG TAG
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Protein sequence | MSKMAQKWDA YYRLMRLDRP IGTMLLLWPC LMALLLAADG MPDLRVLIIF IIGVVVMRAC GCIINDYADR KLDSHVARTR SRPLASGEVT VAEALTLFVV LGLFAFSLVL LLNPLVVQLS VVGIILTIIY PFTKRWTNMP QMFLGVVWSW SIPMAYAAQT GEVPASAWWL FAANWCWTVA YDTMYAMVDR DDDLKVGIKS TAILFGRFDR EIIGAFQLAA LGCFIAAGWS GDRGLLYGLG VLTFVGFSAY QQRLIYGRER GDCFKAFLNN NWAGLSLFLA LGADYAFAAL
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