| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0410 |
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| Symbol | |
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| ID | 4602665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 506845 |
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| End bp | 508020 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639779746 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_926290 |
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| Protein GI | 119773550 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGT TTCAATCTAT TGACGTTGCT GATTTTTACG ATAGTGAAAC CTTTGCACGA
ATTCAGGAAT TCGCCAAAGA CAAGGCAACC CCTTTTGTGG TGATTGATAC CAATATCATC
GCGAAACAAT ACGATGACAT GGTGACCAAC TTCCCGTTTG CCAACGTTTA TTATGCAGTT
AAGGCCAATC CCGCCAAAGA GATCCTGACC CTGCTGAAAG ATAAAGGCTC CAACTTTGAT
ATCGCATCTA TCTACGAGCT GGATATGGTG ATGGCCGTCG GTGTGACTGC GGATCGCGTC
AGCTTCGGCA ACACCATCAA AAAACGCAAA GATGTCCGTG CCTTTTATGA GCGTGGCGTG
CGTTTGTTTG CTTCTGACTC TGAGGCCGAT TTGCGCATGA TTGCCGAAGA AGCCCCTGGC
TCTAAAGTGT ATGTGCGTAT CCTGACAGAA GGTTCGCAAA CCGCTGACTG GCCGTTGTCG
CGCAAGTTCG GTTGCCAAAA TGAAATGGCC TATGAGTTGC TGGCGCTGGC AAAAGAGCTG
GGCCTGGATC CTTATGGCAT ATCCTTCCAC GTGGGTTCTC AGCAGCGCGA TATCGGTGCC
TGGGATGCCG CCATCGGTAA GGTGAAGGTA CTGTTCGATC GTCTGCGTGA AGATCACGGT
ATTGTGCTGA AGATGATTAA CATGGGTGGC GGTTTCCCGG CCAACTACAT AGACAAGACC
AATCAACTCG GTGTTTACGC TCAGCAAATC AAACACTTCC TTAAGGAAGA CTTTGGTGAT
GAGCTGCCTG AAATCATTCT GGAGCCTGGT CGCTCGCTGA TTTCAAATGC CGGCGTGCTC
ATTTCTGAAG TGGTACTTAT CAGCCGTAAG TCTCACACTG CGCTGGAGCG TTGGGTATAC
ACAGATGTGG GTAAATTCTC AGGTCTGATT GAGACCATGG ACGAAGCCAT CAAATACCCC
ATCTTCACCG AAAAGAAGGG TGAACTGGAC AAGTGTGTGA TTGCCGGACC AACCTGTGAC
AGTGCCGACA TCATGTATGA GCACTATGCC TATGGTTTGC CGGCGGATCT CGCCATCGGT
GACCGCCTGT ACTGGCTGAC CGCCGGTGCC TACACCACCA CCTACTCGGC GGTGTGTTTT
AACGGCTTCC CGCCGCTCAA GGATTACTAC CTGTAA
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| Protein sequence | MSQFQSIDVA DFYDSETFAR IQEFAKDKAT PFVVIDTNII AKQYDDMVTN FPFANVYYAV
KANPAKEILT LLKDKGSNFD IASIYELDMV MAVGVTADRV SFGNTIKKRK DVRAFYERGV
RLFASDSEAD LRMIAEEAPG SKVYVRILTE GSQTADWPLS RKFGCQNEMA YELLALAKEL
GLDPYGISFH VGSQQRDIGA WDAAIGKVKV LFDRLREDHG IVLKMINMGG GFPANYIDKT
NQLGVYAQQI KHFLKEDFGD ELPEIILEPG RSLISNAGVL ISEVVLISRK SHTALERWVY
TDVGKFSGLI ETMDEAIKYP IFTEKKGELD KCVIAGPTCD SADIMYEHYA YGLPADLAIG
DRLYWLTAGA YTTTYSAVCF NGFPPLKDYY L
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