Gene Sama_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0404 
Symbol 
ID4602659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp502603 
End bp503061 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content53% 
IMG OID639779740 
Productacetyltransferase 
Protein accessionYP_926284 
Protein GI119773544 
COG category[R] General function prediction only 
COG ID[COG2153] Predicted acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCT GGCAAACACA GGCTTTTGCC GACCTCGACG CCCTGACGCT CTACCGTATA 
TTGAAGCTCA GGGTCGATAT CTTTGTGGTA GAGCAGCATT GTCCCTATCC CGAACTCGAC
GACAAAGATT TGCATCCTCA GTCGATGCAT CTGCTGGGTT GGCAGCAAGA TACGCTGGTG
GCCTATGCAC GCGTACTGCC GCCGGGGCTC AGTTACCCCG AAGCCAGTAT CGGTCGGGTT
GCTGTGGCCG AATCGGTGCG CGGTAGTGGC ATGGCAAGAG TGTTAATGAA CAAAGCCATT
CAACATGCTC TGCAAACATG GCCTGACGCC GGCATTCAAA TTGGGGCGCA GGAATACCTG
CAGGCGTTTT ATACCTCACT TGGTTTTATA CCAGCCTCCG ACGTTTACCT TGAAGATGGG
ATCCCCCATC TGGATATGCG CTTTCATCAA AGGACATGA
 
Protein sequence
MIRWQTQAFA DLDALTLYRI LKLRVDIFVV EQHCPYPELD DKDLHPQSMH LLGWQQDTLV 
AYARVLPPGL SYPEASIGRV AVAESVRGSG MARVLMNKAI QHALQTWPDA GIQIGAQEYL
QAFYTSLGFI PASDVYLEDG IPHLDMRFHQ RT