| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0376 |
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| Symbol | aceF |
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| ID | 4602632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 456531 |
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| End bp | 458459 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639779713 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | YP_926257 |
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| Protein GI | 119773517 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00104894 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAATCG AAATTCATGT ACCCGATATC GGCACTGATG AAGTCGAAGT GACCGAGATC
CTGGTCAAGG TGGGTGATTC CATCACTGAG GATCAGTCGC TGATCACCGT GGAAGGCGAC
AAGTCTTCCA TGGAAGTACC GGCTCCCAAG GCTGGTGTGG TCAAGGAAAT CAAAATTGCG
GTGGGCGACA AGGTCGCCAC CGGCTCACTG ATCATGATGT TTGAAGGTGA GCAAGCAGCT
GCTGCTCCGG CGGCCCAGGC CGCTGCGCCA GTGCCGGTTG CTGCAGCCCC AGCTGCTACA
GCGGTAGCCG CGCTGAAAGA CGTATTCGTG CCTGACATCG GCGGTGACGA AGTTGAAGTC
ACTGAAATTC TGGTGAAAGT AGGCGACAGC ATCACTGATG AGCAGCCACT GATCACAGTA
GAAGGCGACA AGGCTTCTAT GGAAGTGCCT GCGCCGTTCG CCGGTGTGCT CAAAGAAATC
AAGGTCGCCA CCGGTGATAA GGTAGCCACT GGCTCCCTTA TCATGGTGTT CGAGACTCAG
GCTGCATCCG CTGCTCCTGT GGCCGCAGCT GCTCCTGTGG CCGCAGCTGC TGCGCCAGCG
CCGGTTGCCG CCGCGCCAGT TGCCGGCGGT GACAAAGACA TTCACGTGCC GGACATCGGC
GGCGATGAAG TGGAAGTGAC CGAAGTGCTG GTGAAGGTAG GCGACACAGT TGCCGCCGAC
CAGTCGCTGC TGACAGTGGA AGGCGACAAA GCCTCTATGG AAGTACCTGC GCCGGTTGCC
GGTGTGGTTA AGGCCATCAA GGTGGCTGCC GGTGACAAGG TGTCTACCGG TTCACTGATC
ATGGTGTTCG AAGTACAAGG TGCTGCTCCT GCTGCCGCGC CAGCTGCACC TGTGGCTCCG
GCCGCTCCTC AAGCTGCGGC TCCGGCTGCC AATGCCCAGG CCCAGGCTCC GTCTCAGGGG
CAAAGTAAGA CTGGTGAGTT CGTGGAAAAC CACGAGTACG CCCACGCGTC ACCGGTTATC
CGTCGTCTGG CCCGTGAGTT TGGCGTTAAC CTTGCCAAGG TCAAGGGTAC AGGTCGTAAG
GGCCGAGTGG TACGTGAAGA CGTGCAGTCT TACATCAAAG AAGCACTCAA GCGCCTCGAG
TCAGGCTCTG CTACCGCCGC CGCGGGCGCT GCCTCCGGCG CTGGCCTGAA CCTGCTGCCA
TGGCCGAAGG TTGACTTCAG CAAATTTGGT GAAGTTGAGA CTCAGCCGTT GTCACGCATC
AAGAAGATCA GTGGTGCCAA CCTGCACCGT AACTGGGTGA TGATCCCCCA TGTGACTCAG
TTTGATGAGG CCGACATCAC CGAGCTTGAG GACTTCCGCA AGGCGCAAAA CGCCGAAGAA
GCCAAGCGCG ATACCGGTAT GAAGATCACC CCGCTGGTGT TCATCATGAA GGCGGTGGCC
AAGTCGCTGG AAGCCTTCCC ATCATTCAAC GCGTCTCTGT CTGAAGATGG CGAGAGCCTT
ATTCTGAAGA AGTACATCAA CATCGGCATT GCGGTGGATA CCCCCAATGG TCTGGTGGTG
CCTGTGGTAC GTGATGTGAA CAAGAAAGGC ATCTATGAGC TGTCCCGCGA GCTGGCTGAC
ATCTCCAAGA AGGCCCGCGC CGGTAAGCTT ACTGCCTCTG ACATGCAGGG CGGCTGCTTT
ACCATCTCCA GCCTCGGTGG CCTCGGTGGT ACCTCGTTCA CCCCAATCGT GAATGCCCCT
GAAGTGGGTA TTCTGGGTGT GTCCAAGTCT GAGCTCAAGC CCAAGTGGAA CGGCAAGGAA
TTTGTGCCTC GCCTGATGTT GCCACTGTCG CTGTCGTACG ACCACCGGGT GATCGACGGC
GCCGAAGGTG CCAAGTTCAC CACGTATCTG AGCGGTGTAC TGTCAGACAT ACGCAAACTC
GTTCTGTAA
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| Protein sequence | MAIEIHVPDI GTDEVEVTEI LVKVGDSITE DQSLITVEGD KSSMEVPAPK AGVVKEIKIA
VGDKVATGSL IMMFEGEQAA AAPAAQAAAP VPVAAAPAAT AVAALKDVFV PDIGGDEVEV
TEILVKVGDS ITDEQPLITV EGDKASMEVP APFAGVLKEI KVATGDKVAT GSLIMVFETQ
AASAAPVAAA APVAAAAAPA PVAAAPVAGG DKDIHVPDIG GDEVEVTEVL VKVGDTVAAD
QSLLTVEGDK ASMEVPAPVA GVVKAIKVAA GDKVSTGSLI MVFEVQGAAP AAAPAAPVAP
AAPQAAAPAA NAQAQAPSQG QSKTGEFVEN HEYAHASPVI RRLAREFGVN LAKVKGTGRK
GRVVREDVQS YIKEALKRLE SGSATAAAGA ASGAGLNLLP WPKVDFSKFG EVETQPLSRI
KKISGANLHR NWVMIPHVTQ FDEADITELE DFRKAQNAEE AKRDTGMKIT PLVFIMKAVA
KSLEAFPSFN ASLSEDGESL ILKKYINIGI AVDTPNGLVV PVVRDVNKKG IYELSRELAD
ISKKARAGKL TASDMQGGCF TISSLGGLGG TSFTPIVNAP EVGILGVSKS ELKPKWNGKE
FVPRLMLPLS LSYDHRVIDG AEGAKFTTYL SGVLSDIRKL VL
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