| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0373 |
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| Symbol | |
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| ID | 4602629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 451931 |
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| End bp | 452791 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639779710 |
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| Product | regulatory protein AmpE |
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| Protein accession | YP_926254 |
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| Protein GI | 119773514 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.490103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000919241 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACTAT TTTCATTGTT GATGGCGATA CTAGCCGAAC GCCTTAAGTT TTTACCCGAG
ACCTGGCAAT TCGACACCCT GATATCAAAA TTGCATCGCC GGCTGTGGAA AGATGAATTT
ACTCAGGGTC AAGCGTCTGA GTTTCAGGTG TTGTTTGCCC TGCTGTTACC CGCGGTGTTG
GTATATCTGG CACTTATAGT GGTCAGTGGG ATTGCCTGGG GAATGCTCAC ACTGGCGGTG
TGGGTGCTCA CCGCTATGGT GTGTTTCAGT CATCAGGAAC AACGTAAAGC CTTTAAGCGG
TATATTCAGG CGGCATGCAG GGGCGATACC CAAGCCTGTT ATCGTCATGG GTCAGAACTC
GATTGCTCTT CCTGTCTTGA AGCCGTGACT GCCGATGAGC TGGGGCTAAA GGTTGGACAA
AGTGTTGCCT GGATAAACTA TCGCTTTTAC GGCGCTGTGG CCCTGTATTT GATAGCCCTT
GGCCCTGTTG CGGCGGTGCT CTACTGCAGC GTGCGTTACT ACGAGCAGAT GCAAAAGCGC
AGTAATCTGC AGCTCCCTTA TGTGGATGCG CTACTGACAG TATTGGATTG GCTGCCAAGC
CGCATCTTTG CATTTGGTTT TGTGCTGGCA GGACAGTTCA GCAGCGCATT CAATCGTTGG
CGCAAGCTGG CATTCGACCC ATCTACTCCC GCCAGACAAA TTGTTACGGA AACCGCGACC
GAGGCTGAAT CTATTCCACA GCCCTCATCA GCACCTGTAT GCTTGCAACC CACATTAGTA
CTGCTCGGGC TAAGTAAGCG CAATTTTATA CTGCTGCTGG CAGCGGTGTC CCTGCTGACC
ATTTTTGGGA TCATCAACTG A
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| Protein sequence | MALFSLLMAI LAERLKFLPE TWQFDTLISK LHRRLWKDEF TQGQASEFQV LFALLLPAVL
VYLALIVVSG IAWGMLTLAV WVLTAMVCFS HQEQRKAFKR YIQAACRGDT QACYRHGSEL
DCSSCLEAVT ADELGLKVGQ SVAWINYRFY GAVALYLIAL GPVAAVLYCS VRYYEQMQKR
SNLQLPYVDA LLTVLDWLPS RIFAFGFVLA GQFSSAFNRW RKLAFDPSTP ARQIVTETAT
EAESIPQPSS APVCLQPTLV LLGLSKRNFI LLLAAVSLLT IFGIIN
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