| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0371 |
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| Symbol | |
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| ID | 4602627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 450088 |
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| End bp | 450945 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779708 |
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| Product | nicotinate-nucleotide diphosphorylase (carboxylating) |
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| Protein accession | YP_926252 |
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| Protein GI | 119773512 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
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| TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.398309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000104956 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGGAAA ATGACATCAG ACTCTCAGTG AAAGCCGCAT TGGATGAAGA CCTTGGTCAT
GGCGATGCCA GCGCCGACAT CACGGCTCAG CTCATCCCCG AAGATAGAAT TGCCGAAGCA
ACACTGATTA CCCGTGAAGA AGGGATCTTC TGTGGCAAAG CCTGGGCAGA GCAAGTGTTC
AATCAGCTGG GAGGCACAGT TGCCTTGCAT TGGCACGTGG ACGATGGCGA TTGGGTAGTG
CCGAATCAAG TACTGTGTGA GTTGTCAGGC CCCGCGCGCG CCATACTTAC AGGCGAGCGC
ACCGCAATGA ACTTTATCCA AACCCTGTCT GGTGTCGCCA GCCTGACCCG GGTTTACGTG
GACAAGCTGG CCGGAACCGA TTGCCGCCTG CTCGATACCC GCAAGACCAT ACCGGGCCTG
CGAACCGCCC AGAAGTATGC GGTAAGCTGT GGTGGCGGTA AAAATCATCG CATTGGTCTG
TACGATGCCT TCCTGATTAA AGAAAACCAC ATCATGGCCT GCGGTGGCAT TAAAGCCGCC
ATAGATAAAG CAAGAACCTT GCACCCGGAC AAACCGGTTG AAGTGGAAGT CGAGTCTCTG
GCCGAACTGA CTGAAGCGCT GCAGGCAGGC AGCGACATCA TTATGCTGGA TAACTTTGAC
GTCACCATGA TGATAGAAGC CGTAGCCATT AACGATGCAT TCAAGGTGCA AGGTGGCGGT
GCCAAACTGG AAGTGTCGGG TAATGTCACC CTGGACACCC TCGGCGAGTT TGCCAAAACC
GGTGTAGACT TCATCTCCGT TGGTGCACTC ACCAAACACG TCCGCGCAAT GGATCTTTCC
CTGAGGCTTA AACACTAA
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| Protein sequence | MLENDIRLSV KAALDEDLGH GDASADITAQ LIPEDRIAEA TLITREEGIF CGKAWAEQVF
NQLGGTVALH WHVDDGDWVV PNQVLCELSG PARAILTGER TAMNFIQTLS GVASLTRVYV
DKLAGTDCRL LDTRKTIPGL RTAQKYAVSC GGGKNHRIGL YDAFLIKENH IMACGGIKAA
IDKARTLHPD KPVEVEVESL AELTEALQAG SDIIMLDNFD VTMMIEAVAI NDAFKVQGGG
AKLEVSGNVT LDTLGEFAKT GVDFISVGAL TKHVRAMDLS LRLKH
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