| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0370 |
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| Symbol | |
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| ID | 4602626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 447973 |
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| End bp | 448446 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639779707 |
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| Product | prepilin-type cleavage/methylation |
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| Protein accession | YP_926251 |
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| Protein GI | 119773511 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000439379 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000838241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAAGGTA TCAATTTTAA AAAGAACGCC AAGGGTTTCA CCCTGATCGA ACTGATGATC
GTAGTAGCCA TCATCGGTAT CCTTGCCGCC ATCGCGCTGC CTGCTTACAA AACTTACACT
CAACGTGCAA AGTTCAGTGA AGTTGTTTTG GCAGCGACTC CAGCAAAAAC CGCTGTAGAT
GTTTGTGTTC AAACCGGTAC TAGCTGTGAC AATTTGCAAG AAGACTCTAC TGGATGGGCG
GCAAGTAGCT TAGTAACCAG TGTATCCATT GATGCGCAAA TGATAGATGA CCCAGCGAAT
CCTGGTACAC AGATTGTGGA TCCTGCTGGC GTGATTATCA TCACTGTGGA ATCTGTGGGT
AACCCAGTAT TCACCGATGG TCCATACACT TACATTCTAA CCGGCACGCC AAACGCCGGA
GGCTCTATGG ACTGGGCACC ATCAGGTACC TGTAAAGCAG CTGGTTTGTG TTAA
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| Protein sequence | MKGINFKKNA KGFTLIELMI VVAIIGILAA IALPAYKTYT QRAKFSEVVL AATPAKTAVD
VCVQTGTSCD NLQEDSTGWA ASSLVTSVSI DAQMIDDPAN PGTQIVDPAG VIIITVESVG
NPVFTDGPYT YILTGTPNAG GSMDWAPSGT CKAAGLC
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