| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0367 |
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| Symbol | |
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| ID | 4602623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 443934 |
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| End bp | 444848 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639779704 |
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| Product | prepilin peptidase |
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| Protein accession | YP_926248 |
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| Protein GI | 119773508 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0600095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000838241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACTGAAT TTATCTCCCT AATGAGCCAG TTTCCCTGGC TCTTTATTTT GCTCGCATTC
CTGTTCGCAG CCACCATTGG TAGCTTCCTC AATGTCGTAA TTCATCGCTT GCCTGTGATG
ATGAAAAGAG AATGGCAGCA GGAATGTAAT GCCTATCTTG AAGAGTACCA ACCTGAACTT
GTAAAAAAGC TTGGCAAAGC GAATTTGGAC AAGCCAATTG ATAGCTATCC AGAACGTTAT
AACCTGATTG TGCCAGGCTC ATCCTGCCCT AAGTGCGGTA CTATCATTAA GCCCTGGCAC
AATCTGCCTG TACTGGGCTG GATAATCCTT GGCGGTAAAT GCGCTTCCTG CAAAGCCCCA
ATTTCCAGCC GTTATCCCAT AGTGGAAGCC TTTACCGGCC TGACTGTTGC AGCACTGGCG
TGGCACTTTG GTCCCACGTG GCAATTTGTC ACAGCAGCAT TACTCACCTT TGGCTTAATT
GCCATGTCGG GAATCGACCT GGATGAAATG CTACTGCCAG ACAGCCTCAC TCTTCCTCTG
CTGTGGCTGG GATTACTGCT TAATTATCAT GGCCTATTTA CCACTCTGGA AGATGCACTC
ATTGGTGCTG CAGCCGGTTA TCTGTCGCTT TGGTCTGTGT ATTGGCTGTT TAAGCTCACC
ACAGGCAAAG AGGGCATGGG CTACGGTGAT TTTAAACTCA TGGGGCTCTT TGGTGCTTGG
CTCGGCTGGC AAATGCTGCC GTTAATTATT CTTCTCTCAA GCCTGGTCGG TGCTGTCGTT
GGCATACTGA TGATGGTTTG GAAAAGCCAT AAGCGTGAAA ATCCCATCCC ATTTGGTCCC
TATATCGCGG CCGCTGGCTG GATAGCACTT ATTTGGGGAC AAGATATTGT CAGCTGGTAT
CTGGGTTCTC TTTGA
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| Protein sequence | MTEFISLMSQ FPWLFILLAF LFAATIGSFL NVVIHRLPVM MKREWQQECN AYLEEYQPEL
VKKLGKANLD KPIDSYPERY NLIVPGSSCP KCGTIIKPWH NLPVLGWIIL GGKCASCKAP
ISSRYPIVEA FTGLTVAALA WHFGPTWQFV TAALLTFGLI AMSGIDLDEM LLPDSLTLPL
LWLGLLLNYH GLFTTLEDAL IGAAAGYLSL WSVYWLFKLT TGKEGMGYGD FKLMGLFGAW
LGWQMLPLII LLSSLVGAVV GILMMVWKSH KRENPIPFGP YIAAAGWIAL IWGQDIVSWY
LGSL
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