| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0362 |
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| Symbol | |
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| ID | 4602618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 432836 |
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| End bp | 435562 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639779691 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_926243 |
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| Protein GI | 119773503 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0221508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000124471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTTTGGTA ATTTACTGAC AAAAATTTTT GGTAGCCGTA ACGACCGCAC CCTGAAACAA
CTGGGCAAGG TCGTGGTAAA AATTAACGCA TTGGAAGCCG AATACGAAAA GCTTTCCGAT
GAGGAACTCA AGGCCAAAAC GGCTGAGTTC AAGGCCCGTC TCGAAAAGGG CGAGAGTCTC
AATGAGCTGA TGGCTGAAGC CTTTGCTACT GTGCGTGAAG CATCCAAGCG CGTATTTGAG
ATGCGCCACT TCGACGTTCA GCTGATGGGT GGTATGGTAC TGGACAGCAA CCGCATCGCC
GAGATGCGTA CCGGTGAAGG TAAAACCCTG ACCGCCACAC TGCCAGCCTA TCTCAATGCA
CTGACCGGTA AAGGGGTGCA CGTGATCACG GTGAACGACT ATCTGGCTCG CCGTGACGCC
GAGAACAACC GTCCTCTGTT TGAATTCCTC GGTATGTCTG TTGGCGTAAA CGTGGCTGGT
TTGAGCCACG CCGACAAAAA GGCCGCCTAC GATGCTGATA TTACCTACGG CACCAACAAC
GAATTTGGTT TTGACTACCT GCGCGATAAC ATGGCGTTTT CGCCAAACGA TCGCGTCCAG
CGTCCGCTGC ACTATGCCCT GATTGACGAA GTGGACTCTA TCCTTATCGA TGAAGCCCGT
ACGCCACTGA TTATCTCCGG CGCCGCAGAA GACAGCTCAG AACTCTACAT GCGGGTCAAT
AAGTTGATCC CAAGCCTCAT CCGTCAGGAA AAAGAAGACA CTGAGGAGTT TGTGGGTGAG
GGTGACTACT CCATCGATGA GAAGGCTCGC CAGGTACACA TGACCGAGCG CGGTCAGGAA
AAGGTTGAGC AACTGCTGAC CGAAGCTGGC CTGCTTGCCG AAGGTGACTC TCTCTACTCT
GCAGCCAATA TCTCTTTGCT GCACCATGTT AATGCAGCCC TGCGTGCCCA TACCCTGTTC
GAAAAAGACG TGGACTATGT GGTACAAAAT AATGAAGTGG TCATCGTGGA TGAGCACACG
GGCCGTACCA TGCCGGGCCG TCGCTGGTCT GAAGGTTTGC ACCAGGCTGT TGAAGCCAAA
GAAGGCGTGC GCATTCAGAA CGAAAACCAG ACGCTTGCCT CCATTACTTT CCAGAACTAC
TTCCGTCTGT ACGAGAAGCT GGCCGGTATG ACAGGTACTG CCGATACCGA AGCGTTCGAG
TTCCAGCACA TTTATGGTTT GGATACCGTG GTGGTGCCAA CCAATCGCCC TATGGTGCGT
AAAGATATGC CGGATCTGGT ATACCTCACT GCCCGTGAGA AATACCAGGC CATCATCGCC
GATATCAAAG ATTGCCGTGA GCGTGGTCAG CCTGTACTGG TGGGTACCGT TTCCATTGAG
CAGTCAGAGC TGCTGTCGCG TTTGCTGAAC CAGGACAAAA TTCCCCATCA GGTACTGAAC
GCCAAATTCC ACGAAAAAGA AGCGGAAATT GTGGCCCAGG CGGGTCGCAG CGGCGCTGTG
ACAGTAGCCA CCAACATGGC CGGTCGTGGT ACTGACATTG TGCTGGGTGG GAACTGGAAG
TCAGAAATTG AAGCTCTCGA AAACCCAAGT GAAGCCGACA TCGCCAGGAT CCGCGCCGAT
TGGGAAGTTC GCCATAATGC CGTGGTCGAG GCCGGTGGTC TGCACATTCT GGGTACCGAG
CGCCATGAAT CCCGCCGTAT CGACAACCAG CTGCGTGGTC GTTCCGGTCG TCAGGGGGAT
CCGGGTTCTT CCCGCTTCTA TCTGTCGATG GAAGATAACC TGATGCGCAT CTTCGCTTCT
GAGCGTGTCG CCAACATGAT GAAGAAGCTG GGCATGGAAG AGGGCGAAGC CATTGAACAC
CCATGGGTGA CCCGTGCCAT CGAAAACGCC CAGCGTAAAG TCGAAGCCCG CAACTTTGAT
ATCCGTAAGC AACTGCTCGA ATTCGACGAT GTTGCCAACG ACCAGCGTCA GGTTGTTTAC
GCCCAGCGTA ACGAGCTGAT GGATGCCGAA AGCATCGAAG AGACCATCAA GAATATCCAG
GCGGATGTGG TTGATGGCGT AATCAGTCAA TACATTCCAC CTCAGTCAGT GGAAGAGCTG
TGGGATGTGC CTGGTCTGGA AGACCGTTTG GCAAAAGAGT TTGGTCTGCA GTTACCAGTA
CAGGAATGGT TGGATAAAGA AGACGACCTG CACGAAGAGA CCCTGCGTGA GCGTATCGTG
GATACCTGGC GCCAGGCATA CGAAGCAAAA GAGCAGATGG TAGGCACGCC GGTACTTCGC
CAGTTCGAAA AAGCCGTGAT GCTGCAAACC CTCGATGGTC TGTGGAAGGA GCACCTCGCC
GCCATGGACC ACCTGCGTCA AGGCATTCAT CTTCGTGGCT ACGCACAAAA GAACCCCAAG
CAGGAATATA AGCGCGAGTC CTTTGAGTTG TTCCAGCAAA TGCTGGAGAC CTTGAAGCAT
GATGTGATAG CTATTTTGTC CAAGGTGCAG GTGCAGGCAC AGTCTGATGT AGACGAAATG
GAAGCTCGTC GTCGTGAGGA AGAAGCGCGT ATCCAGCGCG AGTATCAACA CGCCGAAGCC
GAGTCCATGG CAAGCGATAA CAGTGAGCTT GCCGATATGG CATCCCATGT TCCTGTGGTA
CGCGACGGTG AGAAAGTTGG CCGTAACGAT CCTTGCCCCT GTGGCTCAGG TAAAAAGTAC
AAGCAGTGCC ACGGTAAGTT GACCTGA
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| Protein sequence | MFGNLLTKIF GSRNDRTLKQ LGKVVVKINA LEAEYEKLSD EELKAKTAEF KARLEKGESL
NELMAEAFAT VREASKRVFE MRHFDVQLMG GMVLDSNRIA EMRTGEGKTL TATLPAYLNA
LTGKGVHVIT VNDYLARRDA ENNRPLFEFL GMSVGVNVAG LSHADKKAAY DADITYGTNN
EFGFDYLRDN MAFSPNDRVQ RPLHYALIDE VDSILIDEAR TPLIISGAAE DSSELYMRVN
KLIPSLIRQE KEDTEEFVGE GDYSIDEKAR QVHMTERGQE KVEQLLTEAG LLAEGDSLYS
AANISLLHHV NAALRAHTLF EKDVDYVVQN NEVVIVDEHT GRTMPGRRWS EGLHQAVEAK
EGVRIQNENQ TLASITFQNY FRLYEKLAGM TGTADTEAFE FQHIYGLDTV VVPTNRPMVR
KDMPDLVYLT AREKYQAIIA DIKDCRERGQ PVLVGTVSIE QSELLSRLLN QDKIPHQVLN
AKFHEKEAEI VAQAGRSGAV TVATNMAGRG TDIVLGGNWK SEIEALENPS EADIARIRAD
WEVRHNAVVE AGGLHILGTE RHESRRIDNQ LRGRSGRQGD PGSSRFYLSM EDNLMRIFAS
ERVANMMKKL GMEEGEAIEH PWVTRAIENA QRKVEARNFD IRKQLLEFDD VANDQRQVVY
AQRNELMDAE SIEETIKNIQ ADVVDGVISQ YIPPQSVEEL WDVPGLEDRL AKEFGLQLPV
QEWLDKEDDL HEETLRERIV DTWRQAYEAK EQMVGTPVLR QFEKAVMLQT LDGLWKEHLA
AMDHLRQGIH LRGYAQKNPK QEYKRESFEL FQQMLETLKH DVIAILSKVQ VQAQSDVDEM
EARRREEEAR IQREYQHAEA ESMASDNSEL ADMASHVPVV RDGEKVGRND PCPCGSGKKY
KQCHGKLT
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