| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0359 |
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| Symbol | lpxC |
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| ID | 4602615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 430462 |
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| End bp | 431382 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639779688 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_926240 |
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| Protein GI | 119773500 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000136144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000771527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGATTTTTC AAAGAACAGT TAAAGAAATG GTTAAGACCA CCGGTGTTGG ATTGCACTCC
GGTAACAAGG TCACACTTAC CATTAAACCC GCGCCAATCA ATACAGGGAT AGTACTGATG
CGTACCGACC TGAACCCCGC CGTGGCCATT CCAGCCAAGG CGAATATGGT TCGGGAAACG
ACCATGTGTA CCGCCCTGGT AAATGATGAA GGTGTTCGCA TTTCGACTAT CGAGCACCTG
TTTGCTGCCC TGGCAGGCCT CGGCATTGAT AATGCCGTTA TCGAAGTGGA CGCGCCCGAA
ATCCCGATTA TGGATGGCAG CGCCAGCCCC TTCGTATTCC TGCTTCAGAG TGCCGGTATC
CAGGAGCAGT CAGCGCCTAA AAAATATCTG CGTATCAAGC GCACCGTACG TGTGGAAGAC
GGCGACAAGT GGGCGGAAAT CCGTCCGTTC CAGGGCTTCA GAGTCAACTT TGCCATTGAC
TTCAATCACC CTGAGATCGC CCGCAGCCAA CAGCATATGG TGATGGACTT TTCCTCTACT
GCCTTTGTGA AAGATATCAG CCGTGCCCGT ACTTTCGGGT TTATGCGAGA TATTGAGTAT
CTGCGTGCCA ACAACCTGGC GCTGGGTGGC AGCATGGAAA ATGCCGTGGT GCTTGATGAA
TACCGCGTCC TCAACCCCGA TGGCCTGCGT TATGAGGACG AGTTCGTTAA GCACAAGATC
CTGGATGCAT TTGGCGATCT CTATGTCGCC GGTCATGCCA TCATAGGTGA GTTTTGTGCC
TATAAGACCG GCCATGCCCT GAACAATCAA TTGGTCAGGG CAGTGCTTGC CGCTCAGGAT
GCCTGGGAAT TGGTAAGCTT TGACAAAGAA GCTGATGCAC CTGTCAGTTT CGCCATGCCC
GGCAATGCAG TGTTTGCCTG A
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| Protein sequence | MIFQRTVKEM VKTTGVGLHS GNKVTLTIKP APINTGIVLM RTDLNPAVAI PAKANMVRET
TMCTALVNDE GVRISTIEHL FAALAGLGID NAVIEVDAPE IPIMDGSASP FVFLLQSAGI
QEQSAPKKYL RIKRTVRVED GDKWAEIRPF QGFRVNFAID FNHPEIARSQ QHMVMDFSST
AFVKDISRAR TFGFMRDIEY LRANNLALGG SMENAVVLDE YRVLNPDGLR YEDEFVKHKI
LDAFGDLYVA GHAIIGEFCA YKTGHALNNQ LVRAVLAAQD AWELVSFDKE ADAPVSFAMP
GNAVFA
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