Gene Sama_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0348 
Symbol 
ID4602604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp416196 
End bp417932 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content56% 
IMG OID639779677 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_926229 
Protein GI119773489 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.221621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGC AGGCAAAACG CAACCAGAAA GCACAACCCA TCCCATGGCG TCTTTACGTT 
GTGGTGGGCT TTGTGTGTCT GCTGTTTACC AGTCTGGTTG GCCGCGCCGC TTATATTCAG
TTGATTGAGC CTGACAAACT GCGCCGTGAA AGCGATATGC GCACTCTGCG TACCAGCAGC
AGCGACGTGC AGCGGGGGCT TATCACCGAC CGCAATGGTG AAATGCTGGC CGTGAGTGTG
CCGGTGCAGG CGGTATACGC GGATCCCAAA GAGGTCCACG ATAAAAATGG CTTTGCTGAT
ATGCGTCGTT GGCAGGCTCT GGCTGACGTA CTCCACGAAA AGCCAGATGC CCTGATTTCC
CGGGTTCAAG ACAACCCAAG TAAACGCTTT ACCTATCTGA AACGGCAAAT CACCCCCGCA
GTGGCAGAGT ATATTCGCCA ACTCAAGTTG CCCGGTGTTT ACCTTAAACC CGAATCACGC
CGCTACTATC CGGCCGGGGA GATCACCGCC CAGCTGATTG GGGTAACCAA TATTGATGAC
GTGGGTATCG AAGGGATTGA AAGTACCTAC AATAACTGGC TGACAGGAAC CCCTGCCAAG
CAGAAAGTCC GCAAATCCCG TGATGGCCAT GTGGTTGAGC GTTTGGACAT AGTGCAGGAA
GGTGAGAGTC CCAACGACCT GGTGCTCAGC ATTGATCAGC GCATCCAGCA GCTTGCCTAC
CGGGAGCTGA AGCGCGCCAC CGAGATGCAT CAGGCGACCT CTGGCTCTGT GGTGGTGATC
GATGTGCTGA CAGGTGAAGT GCTGGCCATG GCCAACACCC CGTCCTACAA CCCCAACAGC
CGTGATGACT GGCAAAGCTT CAAGATGCGT AACCGTGCGG TGACTGACAC CTTCGAGCCC
GGCTCAACGG TAAAACCCTT TGTGGTGGCC GCCGCGCTGG AGTCTGGCAC TGTCAAAGCA
TCTGACATTA TCCCCACATC GCCCGGCTGG ATGCGTCTGG GCGGACGCCA GGTCCGCGAT
TCCAACAATT ACGGTGACAT GTCGCTGACC AAAATTCTGG TGAAGTCGAG CAACATGGGC
GTTGCCAAAC TCTCCCTCGG TATGCCGGTA GAGCAGCTGC TTGGTACTTA CTACTCCATC
GGTTTGGGCA ATTATTCGGG TATTGGATTA CCGGGCGAAA GTGCCGGCCT CATCCAGGAA
AAACATCGCT GGTCTGATTT TGAGCGTGCG ACACTGGCCT TTGGTTACGG CCTGACTACC
ACCACGCTGC AGCTGGCACG CATGTATGCA ACCCTGGGTA ACGGTGGTGT GCTTTATCCC
GCATCCATTC TGAAGTTGAA GCAAAAACCC GAAGGTCAGC AGGTGTTGTC ACCTCAGGTG
GCCAACAACG TAATGAACAT GTTGGTGGGT GTAACTGAGC AGGGTGGTAC GGCGCGCAAG
GCCCATATCG ACGGTTATCC TGTCGCAGGT AAAACAGGTA CCAGCCGCAA AGCGGTGGCT
GGCGGTTACG GTGACGATTA TCTGGCCACT TTCGCCGGGG TTGCCCCCGT CAATAACCCC
CGGCTTGCCA TTGCGGTGGT TATCAACGAA CCCAAGGGTG ACAGATATTA TGGCGGCGAT
GTGTCGGCGC CTGTGTTTTC AAAGGTGATG GCCGGTGCAC TGCAAATGCT GAACGTTGAG
CCCATCAGTA CCCGCGAGCA AGTGCAGCTG GCGGCGAATT TGCGGGAGGC CGAATGA
 
Protein sequence
MSKQAKRNQK AQPIPWRLYV VVGFVCLLFT SLVGRAAYIQ LIEPDKLRRE SDMRTLRTSS 
SDVQRGLITD RNGEMLAVSV PVQAVYADPK EVHDKNGFAD MRRWQALADV LHEKPDALIS
RVQDNPSKRF TYLKRQITPA VAEYIRQLKL PGVYLKPESR RYYPAGEITA QLIGVTNIDD
VGIEGIESTY NNWLTGTPAK QKVRKSRDGH VVERLDIVQE GESPNDLVLS IDQRIQQLAY
RELKRATEMH QATSGSVVVI DVLTGEVLAM ANTPSYNPNS RDDWQSFKMR NRAVTDTFEP
GSTVKPFVVA AALESGTVKA SDIIPTSPGW MRLGGRQVRD SNNYGDMSLT KILVKSSNMG
VAKLSLGMPV EQLLGTYYSI GLGNYSGIGL PGESAGLIQE KHRWSDFERA TLAFGYGLTT
TTLQLARMYA TLGNGGVLYP ASILKLKQKP EGQQVLSPQV ANNVMNMLVG VTEQGGTARK
AHIDGYPVAG KTGTSRKAVA GGYGDDYLAT FAGVAPVNNP RLAIAVVINE PKGDRYYGGD
VSAPVFSKVM AGALQMLNVE PISTREQVQL AANLREAE