Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0348 |
Symbol | |
ID | 4602604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 416196 |
End bp | 417932 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639779677 |
Product | peptidoglycan glycosyltransferase |
Protein accession | YP_926229 |
Protein GI | 119773489 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.221621 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAGC AGGCAAAACG CAACCAGAAA GCACAACCCA TCCCATGGCG TCTTTACGTT GTGGTGGGCT TTGTGTGTCT GCTGTTTACC AGTCTGGTTG GCCGCGCCGC TTATATTCAG TTGATTGAGC CTGACAAACT GCGCCGTGAA AGCGATATGC GCACTCTGCG TACCAGCAGC AGCGACGTGC AGCGGGGGCT TATCACCGAC CGCAATGGTG AAATGCTGGC CGTGAGTGTG CCGGTGCAGG CGGTATACGC GGATCCCAAA GAGGTCCACG ATAAAAATGG CTTTGCTGAT ATGCGTCGTT GGCAGGCTCT GGCTGACGTA CTCCACGAAA AGCCAGATGC CCTGATTTCC CGGGTTCAAG ACAACCCAAG TAAACGCTTT ACCTATCTGA AACGGCAAAT CACCCCCGCA GTGGCAGAGT ATATTCGCCA ACTCAAGTTG CCCGGTGTTT ACCTTAAACC CGAATCACGC CGCTACTATC CGGCCGGGGA GATCACCGCC CAGCTGATTG GGGTAACCAA TATTGATGAC GTGGGTATCG AAGGGATTGA AAGTACCTAC AATAACTGGC TGACAGGAAC CCCTGCCAAG CAGAAAGTCC GCAAATCCCG TGATGGCCAT GTGGTTGAGC GTTTGGACAT AGTGCAGGAA GGTGAGAGTC CCAACGACCT GGTGCTCAGC ATTGATCAGC GCATCCAGCA GCTTGCCTAC CGGGAGCTGA AGCGCGCCAC CGAGATGCAT CAGGCGACCT CTGGCTCTGT GGTGGTGATC GATGTGCTGA CAGGTGAAGT GCTGGCCATG GCCAACACCC CGTCCTACAA CCCCAACAGC CGTGATGACT GGCAAAGCTT CAAGATGCGT AACCGTGCGG TGACTGACAC CTTCGAGCCC GGCTCAACGG TAAAACCCTT TGTGGTGGCC GCCGCGCTGG AGTCTGGCAC TGTCAAAGCA TCTGACATTA TCCCCACATC GCCCGGCTGG ATGCGTCTGG GCGGACGCCA GGTCCGCGAT TCCAACAATT ACGGTGACAT GTCGCTGACC AAAATTCTGG TGAAGTCGAG CAACATGGGC GTTGCCAAAC TCTCCCTCGG TATGCCGGTA GAGCAGCTGC TTGGTACTTA CTACTCCATC GGTTTGGGCA ATTATTCGGG TATTGGATTA CCGGGCGAAA GTGCCGGCCT CATCCAGGAA AAACATCGCT GGTCTGATTT TGAGCGTGCG ACACTGGCCT TTGGTTACGG CCTGACTACC ACCACGCTGC AGCTGGCACG CATGTATGCA ACCCTGGGTA ACGGTGGTGT GCTTTATCCC GCATCCATTC TGAAGTTGAA GCAAAAACCC GAAGGTCAGC AGGTGTTGTC ACCTCAGGTG GCCAACAACG TAATGAACAT GTTGGTGGGT GTAACTGAGC AGGGTGGTAC GGCGCGCAAG GCCCATATCG ACGGTTATCC TGTCGCAGGT AAAACAGGTA CCAGCCGCAA AGCGGTGGCT GGCGGTTACG GTGACGATTA TCTGGCCACT TTCGCCGGGG TTGCCCCCGT CAATAACCCC CGGCTTGCCA TTGCGGTGGT TATCAACGAA CCCAAGGGTG ACAGATATTA TGGCGGCGAT GTGTCGGCGC CTGTGTTTTC AAAGGTGATG GCCGGTGCAC TGCAAATGCT GAACGTTGAG CCCATCAGTA CCCGCGAGCA AGTGCAGCTG GCGGCGAATT TGCGGGAGGC CGAATGA
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Protein sequence | MSKQAKRNQK AQPIPWRLYV VVGFVCLLFT SLVGRAAYIQ LIEPDKLRRE SDMRTLRTSS SDVQRGLITD RNGEMLAVSV PVQAVYADPK EVHDKNGFAD MRRWQALADV LHEKPDALIS RVQDNPSKRF TYLKRQITPA VAEYIRQLKL PGVYLKPESR RYYPAGEITA QLIGVTNIDD VGIEGIESTY NNWLTGTPAK QKVRKSRDGH VVERLDIVQE GESPNDLVLS IDQRIQQLAY RELKRATEMH QATSGSVVVI DVLTGEVLAM ANTPSYNPNS RDDWQSFKMR NRAVTDTFEP GSTVKPFVVA AALESGTVKA SDIIPTSPGW MRLGGRQVRD SNNYGDMSLT KILVKSSNMG VAKLSLGMPV EQLLGTYYSI GLGNYSGIGL PGESAGLIQE KHRWSDFERA TLAFGYGLTT TTLQLARMYA TLGNGGVLYP ASILKLKQKP EGQQVLSPQV ANNVMNMLVG VTEQGGTARK AHIDGYPVAG KTGTSRKAVA GGYGDDYLAT FAGVAPVNNP RLAIAVVINE PKGDRYYGGD VSAPVFSKVM AGALQMLNVE PISTREQVQL AANLREAE
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