| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0343 |
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| Symbol | |
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| ID | 4602599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 412338 |
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| End bp | 413378 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779672 |
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| Product | ferredoxin |
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| Protein accession | YP_926224 |
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| Protein GI | 119773484 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.799415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.508758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTGGT TAAAGTGGCA TCTTTATCTT GCAGCTATGT GCGGTTTGCA AATGCTGTTG
TGGCTCGGCT CTGGCCTGAC GTTGAGTCTG ATTGATGAAG ATTACCTGGA TTCAAATCGT
TATCGCGTTG ACGCAATACA CACACCGATT GGCACAGCAC TGCATTTCGA CCCTGAGAGA
ATCTCACTGT CCAACGCCGT CACTGAAATA CGCCTGGACA ACCTGTTATC GCGGCCGGTC
TATCGGGTAC AACTTGGCGA ACAGAGTATG AGTCTTTGGG CTGACACGCT GGAACCTCTG
AAGCTGGATG ATACTTTGCT CCGTGAAATT GCGGCTGCAA GTATCAGTGT GCCACTGACA
CCCGAGCTGC AATATGTGCG CGGCAATGAG ATTGGTTTCC CCGACTCGGC CAAGGTCGCA
CTGTTCCAAT CCCAAACCGC CAGAGATACC CGCGTGCTGG TCGATGCCGA CAGTGGCAAA
CTCCTTGGCC ATAAAGACAT GGGATCTGAC CTTAAAGAGC TGCTGCTGAT GCTGCACTTT
ATGGACTACG CCCCGGGTAA TGGCATTGCG TTTAACCATA TCGGGATCCG CGTTTTTGCG
TTACTGACAT TGCTGATGGT ATTCACAGGC GCTCTGGTCG TGTGGCAGCG CTGGCAGGCA
GGGTTTTATC GTTGGCACAA AGCGGACGAT AGAAAAAGCA ATCCATGCCT TTTTGTGCTG
GATACCCAAG GCAGCGCACT TGGCCAGTTT TGTGCCGGCC CCTCCTTACT TGAAAGCATT
AACGCCGAGC GGCCCCTGCT GCCAACCCAA TGTGGCGGCG GCGGCAGCTG TGGCCTCTGC
ACTCTGGTGT TTATCGATGC TCCACCCACG GCCACCGAGG CCGATATCAA ACGTCTTGGG
AAAAAAGTAG AGCAAGGGCA TCGTCTCGCT TGCCAACATG GCACTTATAC CGGCCGAGTC
AGGCTCGCTA ACAAAGCCCA GGAGCGCTAT TGGCATAAGC AGTGTCAGGT ATCCGAACCC
GCCCGCAACG AAAATGTCTA A
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| Protein sequence | MNWLKWHLYL AAMCGLQMLL WLGSGLTLSL IDEDYLDSNR YRVDAIHTPI GTALHFDPER
ISLSNAVTEI RLDNLLSRPV YRVQLGEQSM SLWADTLEPL KLDDTLLREI AAASISVPLT
PELQYVRGNE IGFPDSAKVA LFQSQTARDT RVLVDADSGK LLGHKDMGSD LKELLLMLHF
MDYAPGNGIA FNHIGIRVFA LLTLLMVFTG ALVVWQRWQA GFYRWHKADD RKSNPCLFVL
DTQGSALGQF CAGPSLLESI NAERPLLPTQ CGGGGSCGLC TLVFIDAPPT ATEADIKRLG
KKVEQGHRLA CQHGTYTGRV RLANKAQERY WHKQCQVSEP ARNENV
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