| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0341 |
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| Symbol | |
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| ID | 4602597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 410502 |
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| End bp | 411989 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779670 |
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| Product | glycerol kinase |
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| Protein accession | YP_926222 |
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| Protein GI | 119773482 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0554] Glycerol kinase |
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| TIGRFAM ID | [TIGR01311] glycerol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.424974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.511119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACAAGC AATATGTGGT TGCGCTGGAT CAGGGCACAA CCAGTTCCCG CGCCATTGTT
TTTGACCGGG ATGCCAACCT GGTGGCGGTG TCGCAGCGCG AATTCACTCA AATTTACCCC
AAGGGCGGCT GGGTCGAGCA CGACCCCATG GAGATCTGGG CATCCCAGAG CTCGACCCTG
ATTGAAGTCC TGGCCCGTGC CGGTATTCAC AGCGATGAAG TGGCTGCTAT AGGTATCACC
AATCAGCGTG AAACCACCAT CATCTGGGAC AAACTCACGG GTAAACCTGT GTGCAATGCC
ATCGTATGGC AGTGCCGCCG CAGTGCCGCG ATCTGTGAAG CGCTTAAAGC TCAGGGTTTG
GAGCCGCTGT TTCGCGATAA AACAGGCCTC CTGCTCGACC CTTATTTTTC CGGCACCAAA
ATCAAATGGA TTCTGGACAA TGTGCCCGGT GTGCGTGAGC GTGCCGACGC GGGTGAGCTG
CTGTTTGGCA CCGTGGATAC CTGGCTGGTG TGGAAACTCA CCGAAGGTAA GGTCCATGTC
ACCGACCCCA CCAATGCTTC ACGCACCCTG ATGTACAATA TCCATTCTGG CGAATGGGAC
TCGGAGTTGC TGAAGGCGCT GGATATTCCA GCCAGCTTAT TGCCAGAGGT AAAGTCGTCT
CAGGCGGTGT ATGGCACCAC CCGTATCGCC GGTGAGGGTA CTGAAATCCC GGTGGCAGGT
ATGGCCGGCG ATCAGCAGGC GGCGTTGTTT GGCCAGCTGT GTGTCGAGCC CGGTATGGCC
AAAAATACCT ACGGTACCGG CTGCTTTTTG CTGATGAATA CGGGTAAACA AGCTGTCAAA
TCAGAGCATG GTCTGCTGAC TACCATTGCC GTGGGCGATG ATGGTGGTAT CAGCTATGCA
CTGGAGGGCG CCGTGTTTAT GGGCGGTGCC ACCATTCAGT GGCTTAGGGA CGAGCTGGGG
CTGATTCGTG ATGCCAGCGA TACCGAATAT TTTGCGTCCA AGGTTGACGA CACTAATGGC
GTGTATCTGG TACCGGCCTT TGTGGGCCTT GGCGCGCCTT ATTGGGATCC GGATGCCCGC
GGCACCTTGG TTGGGCTGAC CCGCGGTGCT AACCGTAACC ACATCATCCG GGCGGCGCTG
GAATCCATTG CCTACCAAAG CCGTGACCTG CTGGATGCCA TGAGCAAAGA CAGCGGCGTG
GCGCTCAAAC AGCTCAAGGT GGATGGCGGC GCGGTAGCCA ACGATTTTTT GATGCAGTTT
CAGGCCGATA TCTCGGGAGT TGAAGTGCTG CGCCCGGCAC AGACGGAAAC CACCGCTATG
GGCGCGGCGT TCCTTGGTGG TCTCGCCGTC GGTTTCTGGT CCAATGTGGA TGAAATACGG
CACAAGAGCG GCATAGACAG GCGCTTTGTG CCACTGATGG ATGATAAAGA AAGAGCGACG
CTTTACCTTG GATGGCAAGA TGCTGTGCGC CGAAGCCTGA GTAGCTGA
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| Protein sequence | MDKQYVVALD QGTTSSRAIV FDRDANLVAV SQREFTQIYP KGGWVEHDPM EIWASQSSTL
IEVLARAGIH SDEVAAIGIT NQRETTIIWD KLTGKPVCNA IVWQCRRSAA ICEALKAQGL
EPLFRDKTGL LLDPYFSGTK IKWILDNVPG VRERADAGEL LFGTVDTWLV WKLTEGKVHV
TDPTNASRTL MYNIHSGEWD SELLKALDIP ASLLPEVKSS QAVYGTTRIA GEGTEIPVAG
MAGDQQAALF GQLCVEPGMA KNTYGTGCFL LMNTGKQAVK SEHGLLTTIA VGDDGGISYA
LEGAVFMGGA TIQWLRDELG LIRDASDTEY FASKVDDTNG VYLVPAFVGL GAPYWDPDAR
GTLVGLTRGA NRNHIIRAAL ESIAYQSRDL LDAMSKDSGV ALKQLKVDGG AVANDFLMQF
QADISGVEVL RPAQTETTAM GAAFLGGLAV GFWSNVDEIR HKSGIDRRFV PLMDDKERAT
LYLGWQDAVR RSLSS
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