| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0336 |
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| Symbol | |
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| ID | 4602592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 404914 |
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| End bp | 406008 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639779665 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_926217 |
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| Protein GI | 119773477 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.309261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.513692 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTATC AGATAGCCGT ATTGGCCGGT GACGGCATAG GCCCCGAGGT GATGGCAGAG
GCACGTAAGG TGCTGGCAGA AGTAGAGGCG CGCTTCGACC TCAATATCGA GTACAGCGAG
TACGATGTGG GCGGCATTGC CATCGACAAC CACGGCTGTC CGCTGCCTGA CGCTACCCTC
AAGGGCTGTG AAGCGGCCGA TGCCATTTTG TTTGGCTCTG TGGGTGGCCC CAAGTGGGAG
CATTTGCCTC CCAACGAGCA GCCAGAGCGC GGTGCGCTGC TGCCGCTGCG TGGTCACTTC
GAGCTGTTCT GTAACCTGCG TCCGGCCAGG CTGCACACCG GCCTTGAGCA CATGTCGCCG
CTGCGCGCGG ATATCTCCGC CCAAGGTTTT GATGTGCTGT GCGTGCGTGA GCTCACCGGC
GGCATCTACT TCGGTAAGCC AAAAGGCCGT CAGGGCGAGG GCGAAGAGGA AGAAGCCTTC
GACACCATGC GTTACAGCCG CCGTGAAATC CGCCGTATTG CCAAAATCGC CTTCGAGGCG
GCCCGCGGTC GTCGCGGCAA GGTGACCTCG GTGGACAAAG CCAACGTACT GGCCTGCTCT
GTGCTGTGGC GCGAGGTAGT GGAAGAGGTA GCCAAAGACT TCCCCGATGT GACGCTTGAA
CACATCTATA TCGATAACGC CACCATGCAG CTGCTGCGCC GTCCCTTCGA TTTCGACGTG
ATGCTGTGCT CAAACCTGTT CGGTGATATT TTGTCGGACG AAATCGCCAT GCTCACCGGC
TCCATGGGGC TTTTGTCTTC TGCGTCCATG AACGGTTCAG GCTTCGGCCT GTATGAACCA
GCCGGTGGCA GTGCGCCGGA TATCGCCGGC AAAGGCATCG CCAACCCGAT TGCGCAAATT
CTCTCTGCTG CGCTGATGCT GCGTCACAGT CTTAAGCAGG AAGAGGCCGC CGCCTGTATC
GAGCGCGCCG TGGGTGCCGC TTTGGAAGCG GGCTTCTTAA CCGGCGAGCT GCTGTCTGCT
GACCAGCGTC ACAATGCTAA ATCAACCAAA GAAATGGGCG ACTTTATCGC CAATGCAATC
CGGGAAGGTG TGTAA
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| Protein sequence | MSYQIAVLAG DGIGPEVMAE ARKVLAEVEA RFDLNIEYSE YDVGGIAIDN HGCPLPDATL
KGCEAADAIL FGSVGGPKWE HLPPNEQPER GALLPLRGHF ELFCNLRPAR LHTGLEHMSP
LRADISAQGF DVLCVRELTG GIYFGKPKGR QGEGEEEEAF DTMRYSRREI RRIAKIAFEA
ARGRRGKVTS VDKANVLACS VLWREVVEEV AKDFPDVTLE HIYIDNATMQ LLRRPFDFDV
MLCSNLFGDI LSDEIAMLTG SMGLLSSASM NGSGFGLYEP AGGSAPDIAG KGIANPIAQI
LSAALMLRHS LKQEEAAACI ERAVGAALEA GFLTGELLSA DQRHNAKSTK EMGDFIANAI
REGV
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