| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0320 |
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| Symbol | rph |
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| ID | 4602576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 387592 |
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| End bp | 388305 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779649 |
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| Product | ribonuclease PH |
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| Protein accession | YP_926201 |
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| Protein GI | 119773461 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCAG GTAATCGTAC CCCGGCTCAG ACCCGCCCCA TCAGCATCAC CCGTAACTTT
ACTGCCCACG CCGAAGGCTC TGTGCTGGTA GAGTTTGGCG AAACCAAGGT GCTGTGTACC
GCCAGTTTCA CCGAGGGTGT ACCACGCTTC CTTAAAGGCA GTGGGCAGGG TTGGTTGACT
GCCGAATATG GCATGCTGCC GCGTTCTACC CATAGCCGTA TGGACCGCGA AGCCGCCCGT
GGCAAACAGT CTGGCCGTAC CCAGGAAATC CAGCGTCTGA TTGGCCGCGC CCTGCGTGCT
GCCGTGGATT TAAAGCAACT GGGCGAAAAC ACCATAGTGG TGGACTGTGA TGTTATTCAG
GCCGATGGTG GCACCCGTAC CGCAGCTATC ACAGGAGCCT GTGTGGCACT GGTGGATGCG
CTGAACTGGG CCCGCGGTAA AGGTTTGGTG AAAGCCAACC CACTGAAGTT TTTGATTGCG
GCTGTGAGCG TGGGTATCCA CAACGGCGAA GCCATTTGCG ATCTCGAGTA TGTGGAAGAC
AGCGCTGCCG AAACCGATAT GAATGTGGTG ATGACCGAAA CCGGCAAGAT CATTGAAGTT
CAGGGTACGG CCGAGGGTGA GCCTTTCACC CACGAAGAGT TGCTGACCAT GCTGGAGCTG
GCCAAACACG GTATCCGCGA AATCATTGAT ACTCAGAAAG CGGCTCTGAA CTGA
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| Protein sequence | MRPGNRTPAQ TRPISITRNF TAHAEGSVLV EFGETKVLCT ASFTEGVPRF LKGSGQGWLT
AEYGMLPRST HSRMDREAAR GKQSGRTQEI QRLIGRALRA AVDLKQLGEN TIVVDCDVIQ
ADGGTRTAAI TGACVALVDA LNWARGKGLV KANPLKFLIA AVSVGIHNGE AICDLEYVED
SAAETDMNVV MTETGKIIEV QGTAEGEPFT HEELLTMLEL AKHGIREIID TQKAALN
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