Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0304 |
Symbol | |
ID | 4602560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 369739 |
End bp | 372060 |
Gene Length | 2322 bp |
Protein Length | 773 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639779633 |
Product | putative alpha-1,2-mannosidase |
Protein accession | YP_926185 |
Protein GI | 119773445 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3537] Putative alpha-1,2-mannosidase |
TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAA TAACTCTGAA AGAGGGCGCC CTGTCCTTAC CACGTCTGAC ACCCTTGTTG TTAACCCCAA CGCTGTTGAC CTTCTCCTTA CTCACGGCAG TGGGCTGTAC GACTACCCAC GGCACCTCAA ATGCTCAGCA GGTGCACGCC GAGTCCCCGG CGCAAAGCGA AGCCCTCAAC CATGTGGATC CTTTTATCGG CACAGGTGGC CATGGTCACA CCTTTCCCGG TGCTTTGGTC CCCTTTGGCA TGGTGCAGTT GAGCCCGGAT AACCCATCCA AGGGCTGGGA TTGGACCTCG GGTTATCACT ATTCTGACGA TACCTTGCTG GGCTTCAGCC ACACCCACTT ATCAGGCACT GGCGTGGGCG ACATGCTGGA TGTGCTGGTG ATGCCCTTTC GCGGCGACTT TCTGAGCCGC CCAAGAGACG ACAAAGACCG TATCTTCACC CACTATGGCC ATGACAAAGA GAGTGCGACG CCGGGCTATT ACAGCCTGTA TTTGCCGGAA GAACAGGTGC AGGTGGAGCT GACCGCCTCC ACCCGCGCCG GGGTTCACCG CTACCGCTTT GATGGTGACA CAGATGCAAA GCTATTGATT GATTTGGGTT ATGCCCAAAA CTACGACAAA CCCGTGGTGA CCTTCCTGCG GGTCGAAGAT GAGCACACCT TAAGTGGTTA TCGGTTATCT ACCGGTTGGG CCAAAAATCA GCCGCTGTAT TTTGTGGCGA AATTTGATCA GCCCTTCAGT CATCAACTCT ACAGCGAAAA CCAGCCCATC AAGGGTGAGC AGCTACAGGC CGAAAAAGGC CGCATAGTGC TGAACTTTGG TTTTTCGTCG ACCGGTTCTT TGTCGACCGG TTCTTCGTCG GCTGCTTCTT CTGCCGAGAA AACTGCAAAA GTGGTGGAGG CCAGGGTCGC CCTGTCTTAC ACCAGCATTG CCGGTGCCAA GGCGAACCTG AAGGCCGAAG TGGCCGACCT GAGCTTTGCC CAAATCAAAG CCAATGCCCG TCAGGCCTGG GCGCAGCAGC TTGGAAAGTT CGAGGTTGAA GACGGCAACG AGGTCAACAA GACCAAGTTT TACACCGCGC TCTACCATGC CTTTGTCGCG CCCCAGGTAT TCCATGATGT GGATGGCGCC TTTTTCGGTG CCGATGGTGC CGCCCATGCC AACCCGGGCT ATGGCCGTTA TTCATTGTTC TCACTCTGGG ACACCTTCAG GGCTCTGCAT CCGCTGCTGA CGGTCAGCAA CCCCGAGCGG GTCGATGACA TGGTCAAGTC CATGCTGGGC TTTTATGACG AGACCGGGCT ACTGCCCACC TGGGACCTGA TGTCCAACGA AACCGACGTG ATGATTGGAT ACCATGCGGT GCCCGTGATT GTGGACGCCT ATCTAAAGGG TTTAACAACC GCGGACCCAG AACACATCTA CGCCGCCATC AAGGCCTCGG CAATGCAGGA TAGATTTGGC ATCGACAAGT TCCGGGAATA CGGCTTCGTG CCTTCGGATC TGGAAATTGA GGCCGTGTCC AAAACCCTGG AATATGCCTT CGATGACTGG GCAATAGCAC AAATGGCCAA AGCGCTTGGC AAAACTGAAG ACTATCAGGT GTTCAATCAA CGTGCTCAGA GCTACAAAAC CCTGTTTGAC GCTGAAACCG GCTTTATGCG CGGCAAGGAT CATCAAGGTA ACTGGGTAAC GCCTTTCAAT CCCACCTATG TGGAGCACCG CAACACCGAC TACACCGAGG CCAATGCCTG GCAGTACAGC TTCTTTGTGC CCCATGACGT ACCGGGCCTA ATGGCCTTGT ACGGAAATGA GCAGCGCTTT GTGGCCAAAC TGGATGAGCT TTTCTCCACC AGTTCTGAGA TGCAGGGGGA TGTATCCCCG GATATTTCAG GGCTTATTGG CCAATACGCC CACGGCAATG AGCCTGTGCA TCATGTTGCC TACCTGTATG CCTTTACCGA TAAAAAGCAG CAAGGTGAAG CGCGTATCAA AGAAATCCGT GACACCATGT ATCTGGCGCA GCCCGATGGT CTGGCCGGAA ACGATGACCT GGGTCAGATG TCGGCCTGGT ATGTGTTCAG CGCTTTGGGC TTCTATCCGC TGAATCCCGT TGGCGGCGAC TACGTACTCG GCACCCCTCA GTTCGCCAAA GCGACCGTGA TGCTGCCCAA TGGCAAAGCG TTCAAGGTAA TCAAGAAAGG CGAGGGATGG GTGAAGGCCC TGTGGCTTAA TGGCAAAAAG CACGATAGCG CCATCCTCAC CCATCAGCAG CTATTGGACG GCGGAGAACT GGTTTTCGAA TTGGCTGAAT AA
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Protein sequence | MKTITLKEGA LSLPRLTPLL LTPTLLTFSL LTAVGCTTTH GTSNAQQVHA ESPAQSEALN HVDPFIGTGG HGHTFPGALV PFGMVQLSPD NPSKGWDWTS GYHYSDDTLL GFSHTHLSGT GVGDMLDVLV MPFRGDFLSR PRDDKDRIFT HYGHDKESAT PGYYSLYLPE EQVQVELTAS TRAGVHRYRF DGDTDAKLLI DLGYAQNYDK PVVTFLRVED EHTLSGYRLS TGWAKNQPLY FVAKFDQPFS HQLYSENQPI KGEQLQAEKG RIVLNFGFSS TGSLSTGSSS AASSAEKTAK VVEARVALSY TSIAGAKANL KAEVADLSFA QIKANARQAW AQQLGKFEVE DGNEVNKTKF YTALYHAFVA PQVFHDVDGA FFGADGAAHA NPGYGRYSLF SLWDTFRALH PLLTVSNPER VDDMVKSMLG FYDETGLLPT WDLMSNETDV MIGYHAVPVI VDAYLKGLTT ADPEHIYAAI KASAMQDRFG IDKFREYGFV PSDLEIEAVS KTLEYAFDDW AIAQMAKALG KTEDYQVFNQ RAQSYKTLFD AETGFMRGKD HQGNWVTPFN PTYVEHRNTD YTEANAWQYS FFVPHDVPGL MALYGNEQRF VAKLDELFST SSEMQGDVSP DISGLIGQYA HGNEPVHHVA YLYAFTDKKQ QGEARIKEIR DTMYLAQPDG LAGNDDLGQM SAWYVFSALG FYPLNPVGGD YVLGTPQFAK ATVMLPNGKA FKVIKKGEGW VKALWLNGKK HDSAILTHQQ LLDGGELVFE LAE
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