| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0303 |
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| Symbol | |
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| ID | 4602559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 367949 |
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| End bp | 369739 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779632 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_926184 |
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| Protein GI | 119773444 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGG CATGGGTGGA TTTACTGGTT ATAGGCGCGT ATCTGCTGGG CACGTTGGGG
CTTGGGGTTT ATATCTCCCG CCTTGCCAGC AGAGACATGA ATGCCTACTT TCTGGCGGGT
AAGGAAATCC CCTGGTGGGC GCTTGGGGTT TCCAACGCCT CGGGCATGTT CGACATCGCG
GGCACCATGT GGCTGGTGTC CATGTGTTTT GTTTACGGCC TGAAGAGTGC CTGGCTGCCC
TGGGTGTGGC CCATCTTCAA TCAGGTATTC CTGATGGTTT ACCTGTCGGT GTGGCTGCGC
CGCTCCAACG TGATGACAGG GGCCCAGTGG CTGCAGACCC GCTTTGGCAG TGGCAGGGGC
GCCGAGTTGT GCCAGCTGGT GGTGGTGATA TTTGCCATTG TCAGCGCCAT CGGCTTTATC
GCCTATGCCT TTAAAGGCAT TGGAAAATTC GCGGCCATTT TCTTCCCGTG GCAGCTCTCG
CCAGACACCT ATGCCCTGAT TATTTTTGCC GTTACCTGCC TGTATGTGAT TAAGGGCGGC
ATGTATTCGG TGGTGTTTAC CGAGGTGATG CAGTTTGTGA TCATGACCAT AGCCGCCGTG
GCCGTGGGCC TGATTGCCAT TAATCTGGTC ACCCCGGAGC AAATCAAGGC CGCCACCCCG
GAGGGCTGGG ATAACATCTG GTTTGGGTGG CAGCTCGATC TCAACTGGCA GGGACTGATT
GACAGCGTGA ACGACAAGAT TCGCGCCGAC AGTCTGGAGC TGATTGGTCT GATGATCATG
ATGATGCTGT TCAAGGGCGT GCTCTTTTCC ATGGCGGGCC CTGTGCCCAA CTACGATATG
CAGCGCATTC TGGCGACCCG CTCCCCCAAG GAGGCGGCCA AGATGAGCGG CCTGGTGTCT
TTGGTGATGT TTTTCCCCCG TTACATGATG GTGGCCGGTC TTACTGTGCT GGCGCTGGTG
TATATGGGGC CGGAAATCCA GGCCCAGGGG GGCAGCTTCG ACTTCGAGCA AATTCTGCCC
TATGCCATCC ATAACTTTGT GCCCGTGGGC CTGACTGGGC TGCTGATAGC CGGTTTGCTG
GCGGCTTTTA TGTCGACCCT GGCGGCATCG CTCAATGCCG CTCCCGTGTA CTTTGTGAAT
GACATCTACA AGCGCTATTT CCGCCCGGAT GCCGAGGAGA GAACCTACGT TAAGGTCAGC
TATCTGGTGT CTCTGGTGCT GGTGCTGATT GGCGTGGGTC TGGGGCTGAT GCTCTCCAGC
ATCAACGAGA TCATGCAGTG GATCTTTGGT GCCCTCTTTG GCGGCTATGC CGCGGCCAAT
CTACTGAAGT GGCATTGGTG GCGCTTTAAT GCCTATGGCT ACTTCTGGGG CATGATGGCG
GGCTTGCTGG CGTCCTTGTG TCTGCCACTC TTTATGCCGG GTACTCATCC GCTGTTTGCC
TTCCCGCTGC TGCTGGCGCT GAGTCTGGCC GGCTCTATCT TGGGGACGCT GGCGACCCGT
CCTGAGCCGG ACGAGGTGCT GTGCGCCTTC TACCGTCAGG TACGCCCCTG GGGCTGCTGG
GGGCCGGTGC ATGACAAGGT CAAGGAAGCC GATCCCGGCT TCGACGCGGA TACACACCCA
CTGCGGGATA TGGTCAATAT TCTGGTCGGT ATGGCCTGGC AAATCTGTTT GGTGGCCTTG
CCCATCTACC TGGTTATCCA GCAATGGACT CAGGTGTGGG TGGCACTGGC ACTGGCGATA
CTGACATCCT GGTTCCTGAA GAAAAACTGG TTGGATAAGT TGAAAGATTA A
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| Protein sequence | MTLAWVDLLV IGAYLLGTLG LGVYISRLAS RDMNAYFLAG KEIPWWALGV SNASGMFDIA
GTMWLVSMCF VYGLKSAWLP WVWPIFNQVF LMVYLSVWLR RSNVMTGAQW LQTRFGSGRG
AELCQLVVVI FAIVSAIGFI AYAFKGIGKF AAIFFPWQLS PDTYALIIFA VTCLYVIKGG
MYSVVFTEVM QFVIMTIAAV AVGLIAINLV TPEQIKAATP EGWDNIWFGW QLDLNWQGLI
DSVNDKIRAD SLELIGLMIM MMLFKGVLFS MAGPVPNYDM QRILATRSPK EAAKMSGLVS
LVMFFPRYMM VAGLTVLALV YMGPEIQAQG GSFDFEQILP YAIHNFVPVG LTGLLIAGLL
AAFMSTLAAS LNAAPVYFVN DIYKRYFRPD AEERTYVKVS YLVSLVLVLI GVGLGLMLSS
INEIMQWIFG ALFGGYAAAN LLKWHWWRFN AYGYFWGMMA GLLASLCLPL FMPGTHPLFA
FPLLLALSLA GSILGTLATR PEPDEVLCAF YRQVRPWGCW GPVHDKVKEA DPGFDADTHP
LRDMVNILVG MAWQICLVAL PIYLVIQQWT QVWVALALAI LTSWFLKKNW LDKLKD
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