Gene Sama_0297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0297 
Symbol 
ID4602553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp359770 
End bp360816 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content53% 
IMG OID639779626 
Productendo-alpha-mannosidase 
Protein accessionYP_926178 
Protein GI119773438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGCAACT CACGCCTTCA TGTCTTCTAC TATGGCTGGT ACGGCAATCC GCAGCAGGAT 
GGCCAGTGGC AACATTGGAA CCACAGGGTA TTGCCCTATG GTGATATCCC CCTCGAGGGG
CGTTTGGATT TTCCCGGTGC TGATGACATA GGGGCCAACT TTTACCCATC CCTTGGCAGT
TACAGCTCCC ACGATCCCGA GATTATCGAG CAGCATCTGG AGATGATGCG CCAGGCCGGC
ATAGGTGTGG TGTCGGTAAG CTGGCTGGGG GCCGACGATT TTGCTGCCAG GTCCATCGAT
TTCTTTATGG ACAAAGCGGC CGAAAAAGGA CTGCAGATTA ATTTTCATAT TGAACCCAAC
TACCGCAGCG CCGAAGAGTT CCACGCCATT ATTGCTGAAT TAATGCGGAA ATTTGGCACC
CATCCCGCCT TGTACCGTTA TCGGGGCAAA CCCCTTTACT ATGTATACGA CTCCTACAAG
ATGCCGGTGA GTGAATGGCA AAAGCTGTTG CTGCCGGGAG GAGAGCTTAG CCTGAGAACT
CCTGAACTCG ATGGGCAATT TATCGGTTTA TGGGTAAATC AGGGCGAAGA AGCCTTTTTT
CTCGATACCG GCTTCGATGG TTTTTACACC TACTTTGCCA GCGAGGGCTT TGTGTGGGGC
AGTACCAGTA CCAACTGGCC TTACCTGGCT GGCTGGGCCA GTCGTCATGG CAAACTCTTT
ATTCCCAGTG TCGGCCCCGG CTATGCCGAT GACAGAATTC GTCCCTGGAA CGGTGCCAAC
TTCAAGGCCC GTGAGCAGGG CCGTTATTAC GACCGCATGT TCAGTCAGGC ACTTAACACC
AAGCCAGACA TAGTAACCAT TACCTCCTTC AATGAGTGGC ACGAAGGCAC CCAGATTGAG
CCCGCCGTCG TGAAGCAACT GCCCGATTAC CGCTATCTGG ATTATGGCGA CTTACCCGAA
GACTATTATT TGCAGCGTAC CCTGGACTGG AGCCGCAAGC TCTCGGCCAT CCCGGTTAAT
TCTTCGCAGC AGGAAGGCAG TCGATGA
 
Protein sequence
MGNSRLHVFY YGWYGNPQQD GQWQHWNHRV LPYGDIPLEG RLDFPGADDI GANFYPSLGS 
YSSHDPEIIE QHLEMMRQAG IGVVSVSWLG ADDFAARSID FFMDKAAEKG LQINFHIEPN
YRSAEEFHAI IAELMRKFGT HPALYRYRGK PLYYVYDSYK MPVSEWQKLL LPGGELSLRT
PELDGQFIGL WVNQGEEAFF LDTGFDGFYT YFASEGFVWG STSTNWPYLA GWASRHGKLF
IPSVGPGYAD DRIRPWNGAN FKAREQGRYY DRMFSQALNT KPDIVTITSF NEWHEGTQIE
PAVVKQLPDY RYLDYGDLPE DYYLQRTLDW SRKLSAIPVN SSQQEGSR