| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0294 |
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| Symbol | |
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| ID | 4602550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 352411 |
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| End bp | 353418 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639779623 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_926175 |
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| Protein GI | 119773435 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.28119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAATA TTAAGAAGGT AAGTGAACTG GCGGGTGTCT CCACCGCGAC TGTTTCAAGG
ACGCTGAAAA GCCCGGAAAG AGTCAGTGAG CAAACCCGTG CCAAGGTCAT GCAGGCAGTA
AAGCAAGCCG GATATCGTCC AAATTGGATG GCCACCAGTG TTAAAACTGG CAAGTCCAAT
GCCATAGTGG TGTTGGTCCC CAACCTGGTT AACCCATTCT TTATGCGGAT TATCGAAGGG
ATAGAGCAGG CGGCTCAGGA GAAAGGCTAT TGCGTGCTGC TCGGCGACAC CCAGGGGCTG
CAGGCCCGGG AGCATGAGTA TGCCAGCATG GTGCTCACCA ACAGGGCCGA TGGTCTTATT
CAGCTGGACC ATTCATTTCC TTTTTCTGAT AACGATGCTG ATCTGGCAGC CACAATCCCC
ATGGTCAGTG TCTGTGAACG TATCGAGGGG GATCGCAAAT ACCCCTTTAT TGAGCTCGAC
AACCACGCCG CAGGCAGGGC CCTGGCCCAT CATCTGATAG GCTTTGGACA CAAACATTTC
GGGATTATTG CCGGTCAGCG CCGCAGCCAA ATACACCATG ATCGCCTGAC GGGCATTATG
AGTGTGCTTC AGGGTGAGGG TATTGATTTT AAAGAAGATA TGCTGGTTGG TAGTAGCTAC
AGCATAGAGA CGGGTATCGA AGGGGCGAGG GAGCTTCTCA GCCGAAATCC GCGCCCGAGC
GCGATTTTTT GCTTCAACGA TGATATCGCC ATCGGTGCTA TGTTTGAAAT CAAGTCCCAG
GGGCTGAAGA TCCCCGATGA TATCTCTGTC ACCGGCTTTG ATAACGTCAA GGTGTCGGCT
TATATGGACC CGCCTTTGAC CACCATAGAC CAGCCTGCCT ACGAGATGGG ACGCAATGCC
GTTGAGGTAT TGGTGCAACA AATCAACCGC CTTCCCCTGG CGCGCTCCCG GGTGATTATG
CCATTCCATT TATTGGAGCG TGGCAGCACG GGCCCCCTTA AAATTTAG
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| Protein sequence | MTNIKKVSEL AGVSTATVSR TLKSPERVSE QTRAKVMQAV KQAGYRPNWM ATSVKTGKSN
AIVVLVPNLV NPFFMRIIEG IEQAAQEKGY CVLLGDTQGL QAREHEYASM VLTNRADGLI
QLDHSFPFSD NDADLAATIP MVSVCERIEG DRKYPFIELD NHAAGRALAH HLIGFGHKHF
GIIAGQRRSQ IHHDRLTGIM SVLQGEGIDF KEDMLVGSSY SIETGIEGAR ELLSRNPRPS
AIFCFNDDIA IGAMFEIKSQ GLKIPDDISV TGFDNVKVSA YMDPPLTTID QPAYEMGRNA
VEVLVQQINR LPLARSRVIM PFHLLERGST GPLKI
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