| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0293 |
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| Symbol | |
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| ID | 4602549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 349772 |
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| End bp | 352120 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639779622 |
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| Product | putative alpha-1,2-mannosidase |
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| Protein accession | YP_926174 |
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| Protein GI | 119773434 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3537] Putative alpha-1,2-mannosidase |
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| TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.262519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAGGT CCAAGGTCTG TATTGCCGTC ATAGGACTAT CGCTGGTCGC ATGCCAGACA
AGCAATCACA GTGCTTCTCC CACACACGTC GCTGCCACAC AACGAACCAA TCTGGTCAGT
CAGGAGCTGG TGCAGTACGT GAATCCCCTG ATGGGAACAG ACTCCAAGTT CAGCCTTTCC
AATGGCAATA CCTACCCGGC AATAGCCACG CCATGGGCCA TGCACTTTTG GAGCCCGATG
ACGGCCCCCA TGGGTGACGG TTGGACCTAC AAGTACGACG ACGATACCCT GCGCGGCATC
AAACAGACTC ATCAGCCCAG CCCCTGGCTC AATGATTATG GTGCCTTTTC CCTGATGGCT
GTCACCGGGG CGCTCAAGTT TAAGGAAGAC GAGCGCGCCT CCTGGTTTTC CCATAAGGCC
GAAACCGTCA GCCCCGATCA CTACTCTGTT TATCTGGCCG ACTACGATGT CACCATGGAG
GTGACGCCCA CCGAGCGCGC CGCCCAGTTC CGCTTCACCT TCCCCGAGAC CGAGCAGGCC
TACATTCTGC TGGATGCCTT CAATAAAGGC TCCATGGTTC GCATCCTGCC GGAGCAGCGC
AAAATTGTCG GTTATGCCCG CAATAACCAC GGCGGCGTAC CCGACAACTT CCACAACTAC
TTTGTGATTG AGTTCGATAA AGAGTTCGAG CTGACCCACA CCTGGCACGA CGGATGGGCA
CTGCAGCCAA ACCAGTTGAG CAGTGAAGGT GAGCATGTGG GTGCCATCAT TGGCTTTAAG
ACCCAGCGTG GCGAGCAGGT GCATGCCAAA GTCGCCTCCT CCTTCATCAG TCCGGAGCAG
GCCGAAATCA ACCTGCGCCG CGAGATTGGC GGGCAAAGCT TTACCGAGAC CCAGACCGCA
GCCAGACAAA GCTGGCAAAA GGAGCTGTCG CGTATTCGGG TCGAAGATCA GGACCTGGAT
GAGGTAAAGA CCTTTTACTC TGCCCTTTAC CGGGTATTGC TGTTCCCACG CAAGTTTTAC
GAGTACGACG CCAACAATCA GCTGGTGCAT TACAGCCCCT ATAATGGCGA AGTCCTCCCC
GGTTATATGT TTACCGACAA TGGCTTCTGG GACACCTTCC GCGCCGTGTT CCCCTTCTTC
ACCCTGATGT ATCCCGAGCT GGATGCCCAA ATCATGGCGG GACTGGCCAA CACCTATAAA
GAGTCTGGTT GGTTGCCTGA ATGGGCCAGC CCCGGCCACA GAAATGTGAT GGTAGGTTCC
AACTCAGCCA TCAATATCGC CGATGCCTAT TTAAAGGGCA TTCGCGGATT TGATATCGAT
ACCCTGTACG AGGCCGCCCG GAAAAACGCC GAAGTGAATG AGGGTCGCCC CATGACCTCC
GTCGGCCGCG AAGGCGTGGA TTACTACAAC AAACTGGGCT ACGTGCCCTA TGACGTGGGC
ATCCACGAAA ATGCCGCCCG CACCCTGGAA TATGCCTTTG CCGACTTCAA TCTATACAAG
CTGGCCAAGG CCCTTGGCAA GACTGAAGAT GCCGAGCTGT TCAAACAGCG CGCCTATAAC
TATCGCCACC TGTTTGACAC AGAGACCGGC TGGATGCGGG GTAAAAATCA GGACGGCAGC
TTCCAGTCAC CCTTCAACCC GCTGAAATGG GGTGATGCCT TTACCGAAGG CAACGCACTG
CACTACAGCT GGTCGGTGTT TCACGATATT GAAGGCCTGA AGCAGCTCAT GGGAGGCCAG
CAGGGCTTTA TCGACAAGCT GGATCAGGTA TTCGATATGC CGCCGCTGTT TGATGATTCC
TATTATGGTT TCACCATCCA TGAAATCCGC GAGATGCAAA TCGTCAACAT GGGCAACTAC
GCCCATGGCA ATCAGCCTAT CCAGCACATG ATTTACCTCT ACAATCACGC CGGTCAGCCC
TGGAAGGCTC AGCAAAAAGT CCGTGACGTG ATGAATCGTC TCTATTCGGC GACCCCGGAC
GGTTATTGCG GGGATGAGGA CAACGGCCAA ACCTCGGCCT GGTACGTGTT CAGTGCACTG
GGCTTTTATC CGGTCACACC GGGCACACCT GAGTATGTGA TTGGCAGCCC TCTGTTTGAC
AAGGTCACCC TGACGCTGGA AGACGGTAAA ACCTTCGTTA TCGAGTCAGA CAACAACCTG
AATGCCAACC CCTATATTCA GCAGGCCCTG CTCAATGGCA AGGCATTGAA CCGGAGCTGG
CTCGATCATC ACGAGATCCA GGCCGGTGGC ACCCTGAACT TCGACATGGG CGCCACCCCC
AATAAAGCCT GGGCCAGCGA TGCCAATGCC CAGCCTTACT CCATGTCGTT GGAAACAACG
CGTCCCTAA
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| Protein sequence | MIRSKVCIAV IGLSLVACQT SNHSASPTHV AATQRTNLVS QELVQYVNPL MGTDSKFSLS
NGNTYPAIAT PWAMHFWSPM TAPMGDGWTY KYDDDTLRGI KQTHQPSPWL NDYGAFSLMA
VTGALKFKED ERASWFSHKA ETVSPDHYSV YLADYDVTME VTPTERAAQF RFTFPETEQA
YILLDAFNKG SMVRILPEQR KIVGYARNNH GGVPDNFHNY FVIEFDKEFE LTHTWHDGWA
LQPNQLSSEG EHVGAIIGFK TQRGEQVHAK VASSFISPEQ AEINLRREIG GQSFTETQTA
ARQSWQKELS RIRVEDQDLD EVKTFYSALY RVLLFPRKFY EYDANNQLVH YSPYNGEVLP
GYMFTDNGFW DTFRAVFPFF TLMYPELDAQ IMAGLANTYK ESGWLPEWAS PGHRNVMVGS
NSAINIADAY LKGIRGFDID TLYEAARKNA EVNEGRPMTS VGREGVDYYN KLGYVPYDVG
IHENAARTLE YAFADFNLYK LAKALGKTED AELFKQRAYN YRHLFDTETG WMRGKNQDGS
FQSPFNPLKW GDAFTEGNAL HYSWSVFHDI EGLKQLMGGQ QGFIDKLDQV FDMPPLFDDS
YYGFTIHEIR EMQIVNMGNY AHGNQPIQHM IYLYNHAGQP WKAQQKVRDV MNRLYSATPD
GYCGDEDNGQ TSAWYVFSAL GFYPVTPGTP EYVIGSPLFD KVTLTLEDGK TFVIESDNNL
NANPYIQQAL LNGKALNRSW LDHHEIQAGG TLNFDMGATP NKAWASDANA QPYSMSLETT
RP
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