| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0292 |
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| Symbol | |
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| ID | 4602548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 348492 |
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| End bp | 349661 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779621 |
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| Product | glucose/galactose transporter |
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| Protein accession | YP_926173 |
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| Protein GI | 119773433 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCC TGTTTTTTAT CTGGGGCTTT ATCACCGCCC TGAACGATAT CCTGATCCCG
CACCTGAAAG CGGCCTTCGA GCTCAGCTAC ACCCAGGCTA TGCTGGTGCA GTTCTGCTTC
TTCGGCGCCT ATTTCATCGT TTCGCCCTTC GCCGGCAAAT TGATTGAAAA AATTGGCTAT
ATCCGCGGCA TAGTCACGGG TTTGTGTACC ATGGCAACCG GGTGTTTGCT GTTTTACCCT
GCTGCAGAAG TCTCTGTTTA CGCGCTGTTT TTGCTGGGCC TTTTTGTGCT GGCAAGCGGT
ATTACCATAT TGCAGGTGTC TGCCAATCCT TACGTCGCCA TTCTGGGGGC TGAGCGCACC
GCAGCCAGTC GCCTGAGTCT GGCCCAGGCC ATCAACTCCC TTGGGCATAC TCTGGCGCCT
CTGTTTGGTG CGGCGCTTAT CTTCGGCGCC GCCAGCAACG CCCATGCAGT GCAGCTGCCC
TACCTCATTC TGGCGGGTGC CGTATTGCTT ACCGCCGTGG GCTTTGTGTT TTTGAAGCTC
CCTACCCTGC AAACCGACCA TGAAACCCAG GTCAGCCACA GTGACAGCAT TTGGCAGCAT
AAACACCTGG TATTGGGCGC CCTCGCCATC TTCCTGTATG TGGGTGCCGA AGTGTCTGTT
GGCAGCTTTT TGGTAAACTA TTTCTCAGAG AGCCACATCG CCGCATTGAG CGAGCAGGAA
GCCAGCCGCA TGGTGTCTTA CTATTGGGGC GGCGCCATGG TGGGCCGTTT CGTGGGTTCA
GCCCTGACCC GAATACTGCA ACCAACCTAT GTGCTGGCGA CCAATGCCCT GATGGCGATA
CTGCTGTTAG TGCTGACCAT GAACAGCAGC GGCGCTCTGG CCATGTGGTC TGTACTGGCG
GTGGGTTTCT TTAACTCCAT CATGTTCCCC ACCATATTCA CCCTGGCAAT CCGAGGCCTT
GGCCCCTTAA CCAGCCGGGG CTCGGGATTG CTGTGTCAGG CCATCGTTGG CGGTGCCATA
CTGCCACTGC TGCAAGGCGT GGTTGCCGAC AGCAGCTCGG TGCAGTTCAG TTTTGTCATC
CCCATGGTGG CCTATTTGTA TATCGGCTGG TACGCCCTGC GGGGCAGTAA AGCCTGTGAA
AAAGCCAAGA TTGTAGAGGC CCAGTCATGA
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| Protein sequence | MTTLFFIWGF ITALNDILIP HLKAAFELSY TQAMLVQFCF FGAYFIVSPF AGKLIEKIGY
IRGIVTGLCT MATGCLLFYP AAEVSVYALF LLGLFVLASG ITILQVSANP YVAILGAERT
AASRLSLAQA INSLGHTLAP LFGAALIFGA ASNAHAVQLP YLILAGAVLL TAVGFVFLKL
PTLQTDHETQ VSHSDSIWQH KHLVLGALAI FLYVGAEVSV GSFLVNYFSE SHIAALSEQE
ASRMVSYYWG GAMVGRFVGS ALTRILQPTY VLATNALMAI LLLVLTMNSS GALAMWSVLA
VGFFNSIMFP TIFTLAIRGL GPLTSRGSGL LCQAIVGGAI LPLLQGVVAD SSSVQFSFVI
PMVAYLYIGW YALRGSKACE KAKIVEAQS
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