| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0290 |
|---|
| Symbol | |
|---|
| ID | 4602546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 346298 |
|---|
| End bp | 347485 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639779619 |
|---|
| Product | N-acylglucosamine 2-epimerase |
|---|
| Protein accession | YP_926171 |
|---|
| Protein GI | 119773431 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2942] N-acyl-D-glucosamine 2-epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTTT TCTCCCAGAC ATTTCTTCTT GAACACTGCC AGAGCATTTT GGATTTCTAC
ACCGACCGGG TAGTGGATCC AAGCGGCGGC TATCACCAGA ACTTTCTCGA CGACGGCAGC
CTGTTTGATA CCCATTTCAA ACAGCTGGTA AGCAGCACCC GCATTCTGGT GAACTATGCC
ACTGCCGGTA TCCTGTTTGG TCGTCAGGAT TATCTGGATA TTGCCAGGCA TGGCCTGGAT
TATCTGGAAG AAGTGCACTG GCAGGCGTCC AGTCAAACCT ACGCCTGGAC CCTGGATAAC
CACAAGCCGC TGGACATGAC CCAGCAGGCC TATGGTTATG CCTTTGTGCT GCTGGCCTAT
GCTGCGGCTC GCAAGGCAGA CCTGGTGCAG GACGACAGCA AACTGCAACA GGTATACGAC
TTACTGGAGC AGCGTTTCTG GCAAGCTGAA TATGGCCTCT ATGCCGATGA AATCAGCCCC
GAGGGCGTGC TCAGTCCCTA TCGCGGCCAA AATGCCAACA TGCACCTGTG TGAAGCCATG
CTGGCGGCCT TTGAAGCCAC GGGTAACAAC CAGTATCTGG AGCGTGCTTC CCAACTGGCC
CAGAGTATTG CCGTGCGTCA GGCGTCACTG ACAAACGATT TGGTGTGGGA ACATTACACC
CCCGAGTTCA AACCAGACTG GGATTACAAC AGAGACGACC CCAAAAACCT TTATCGTCCC
TGGGGCTTTC AGCCCGGGCA TCAGACCGAG TGGGCGAAAC TGCTGCTGAT CCTCAATCGT
CATGCGCCGC AGGCCTGGCA GATTGAACGC GCAGCGTCCC TGTTTGACCG CGCTTATCAA
CAAGCCTGGG ACAATCAGGA CGGTGGCCTC GTCTATGGGT TTGATCCCGA GGGCAACTGG
TGTGACGATG ACAAGTACTT CTGGGTACAG GCCGAAAGCT TCGCCGCTGC CGCCATGTTG
CATAAAGCGA CGGGTGACGA TAAGTACCTG ACCCAGTATG ACGCCCTGTG GCAGTACAGC
TGGGCCCACA TGGTGGACCA TGAATACGGC GCCTGGTTCA GGGTACTGAG AAAGGACAAC
AGCAAGTATT CCAATCAGAA AAGTGCCGCC GGGGCCAAGT GTGACTATCA CACCCTGGGA
GCCTGCTTCG AAGTCTTGCG CGTGCTGGGC CACCCGGCAC TGAAATAA
|
|---|
| Protein sequence | MNFFSQTFLL EHCQSILDFY TDRVVDPSGG YHQNFLDDGS LFDTHFKQLV SSTRILVNYA
TAGILFGRQD YLDIARHGLD YLEEVHWQAS SQTYAWTLDN HKPLDMTQQA YGYAFVLLAY
AAARKADLVQ DDSKLQQVYD LLEQRFWQAE YGLYADEISP EGVLSPYRGQ NANMHLCEAM
LAAFEATGNN QYLERASQLA QSIAVRQASL TNDLVWEHYT PEFKPDWDYN RDDPKNLYRP
WGFQPGHQTE WAKLLLILNR HAPQAWQIER AASLFDRAYQ QAWDNQDGGL VYGFDPEGNW
CDDDKYFWVQ AESFAAAAML HKATGDDKYL TQYDALWQYS WAHMVDHEYG AWFRVLRKDN
SKYSNQKSAA GAKCDYHTLG ACFEVLRVLG HPALK
|
|---|
| |