| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0289 |
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| Symbol | |
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| ID | 4602545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 343985 |
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| End bp | 346240 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779618 |
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| Product | putative alpha-1,2-mannosidase |
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| Protein accession | YP_926170 |
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| Protein GI | 119773430 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3537] Putative alpha-1,2-mannosidase |
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| TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TTGCCGCACT GCTGCTGACC GCGTCCCTGG CAGCATGCAA CCAGCAACCC
AGCCAGGTGC AAAGCCACGA ACAACAAAAG CCCACCAGCC AGTCACAAAT GGAGCACGCT
GCGGATGTGC TCGCCTATGT TGACCCCTTT ATCGGCACCG ATGGCAAGGG TAAAACCTTC
CCCGGTGCTA CCGTGCCCCA TGGCATGGTG CAGCTCAGCC CCGACAATGG CCGCACCGGC
TGGGACTGGA TAGCGGGCTA CTTCTATCCC GACAACATCA TTGCCGGCTT CAGCCACACC
CATTTGTCCG GCACAGGTGC CGGGGATCTG TATGACATCT CCTTTATGCC CCTGACCCGG
CCTTTCAAGC GGGTGCAAAC CGAGGGCGGT CCGGCCGACG GCACCATAGT GTCCCATTTC
AGCCACGAGC AAGAGCAGGC CAGCCCCGGT TATTACCGGG TCAGATTGCA GGACTACGAA
ATCAAGGTGG AGCTGACCGC AGGTGCGCGC TCCGGCCTGC AAAGATACAG TTTTCCGACC
ACGGCCACCG AAGGTGTGGT GCGGCTCGAT TTGGGTTATA GCCGCAACTG GGACAAAACC
GTTGCCACCC ATGTTGAAAT CATCGATGCC TACAGCATTG GCGGGTATCG CAAATCCACC
GGTTGGGCCG AGGATCAGCG GGTCTATTTT TACAGCCGTT TTTCACAGCC CATCGCCAGT
CAGCTGTTGT TTGTCGATGG CAAACAGGTC TCCCACACAC AGGCTGAGGC CGACAATATC
GCGCTTGAGC TCAACTTCGA TTTGGCCCAG AGCCAATCAA AGGACAGGTC TTTACTGGTG
CACACCGCCA TCAGCTCGGT GAGCATAGAT AATGCACTGG CAAACCTTGA GGCCGACGGC
AAGCTGCTGG ATTTCCCGGG CACCCTGGCC GCCGCCAAAG ATGCCTGGCG TGGTGAGCTT
GCCAAAGTTC GGGTGTCGGC ATCCGAGGAT AACCTCAGGC AGTTTTATAC CGCCATGTAC
CATGCCTCAC TCGCCCCACG ACTCTTCTCG GATACCGATG GCAGCTACAA GGGGCCGGAT
GGCGCAATCC ATCAAGCCGA AGGCCATCCA CGCTACGAAT TCTTCTCCCT GTGGGATACC
TTCAGGGCGC TGCACCCCTG GAAAACCCTT GTCGACCAGG CTCGCACCCG GGAGATGATG
GACAGCATGA TGGACCATTA CCGGGTAGCC GGGCGTTTAC CCGTGTGGAT TTTTCAGGGC
AATGAAACCG ACATGATGCT GGGCTACCAC TCGGTGCCGG TATTGGTCGA TGCCTATCTG
AAGGGCCTTA CCGATATTGA TGGCGAACAC TTGCTTAATG CCGCCCTGCA CAGTGCAAAG
CAAGAGGCTT TTGGCCTGGC GAGTTACCAG CAGCTGGGTT TTGTGCCCTA CACAGAGCGC
AAGTGGAATG TGGCCCTGAC GCTAGAATAT GCCTTCGATG ACTGGGCTAT CGCACGCCTC
GCCAAAGCCT TGGGTAAAGA AGATATTTAT CAGGAATTTG CCACACGGTC ACAGAACTAT
CGCCGCCATT TTGACGCCCA AACCGGCTTT ATGCGCGCCC TGGATCCCCA TGGGCAATTC
CGTCTCCCCT TCGACCCCAA TGCCTATCAC CCGGAAGACT ACTGTGAGGC CAATGCCTGG
CAATACAGCT TCTTTGTACC CCACGATGTG GCGGGCATGA TTGAAATGAT GGGCGGCAGC
GCCGCTGTCA GCGCCAAACT GGATGCCATG TTCGGTACCG AGCAGGCGCT GGACGAGTTC
CCCGAATGGA TCTCCGGCTA TATCGGCCAG TATGTCCACG GCAACGAGCC CAGCCACCAT
GTGCCCTACC TCTATCAATA TCTGGGCGAA GCACATAAGA CCCAGCGTCT GGTGCGGCAG
ATAATGCACG AGCTTTACAC CACGGCGCCC GATGGACTGG CCGGCAACGA AGATGCCGGC
CAAATGTCGG CCTGGTACCT CTTCAGTGCG CTGGGCTTTT ACCCCGTGGA CCCGGTATCC
GGTGAATATG TGCTTGGCAG CCCCGAGGTC GACAGCGCCG ATATCCAGCT TGAAAATGGT
AACGTCTTTA AAATTCGTAC AATTAATCAA GGACCTGAAC ATGTCTATGT CAAGCAGGTC
ACCTTGAACG GCAAGCCCTT GAACGGATAT ATTTTACGAC ATTCAGATAT TCTGGCCGGT
GGTGAACTGG TCTTTACCAT GAGCCCTCAG CCATGA
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| Protein sequence | MKKIAALLLT ASLAACNQQP SQVQSHEQQK PTSQSQMEHA ADVLAYVDPF IGTDGKGKTF
PGATVPHGMV QLSPDNGRTG WDWIAGYFYP DNIIAGFSHT HLSGTGAGDL YDISFMPLTR
PFKRVQTEGG PADGTIVSHF SHEQEQASPG YYRVRLQDYE IKVELTAGAR SGLQRYSFPT
TATEGVVRLD LGYSRNWDKT VATHVEIIDA YSIGGYRKST GWAEDQRVYF YSRFSQPIAS
QLLFVDGKQV SHTQAEADNI ALELNFDLAQ SQSKDRSLLV HTAISSVSID NALANLEADG
KLLDFPGTLA AAKDAWRGEL AKVRVSASED NLRQFYTAMY HASLAPRLFS DTDGSYKGPD
GAIHQAEGHP RYEFFSLWDT FRALHPWKTL VDQARTREMM DSMMDHYRVA GRLPVWIFQG
NETDMMLGYH SVPVLVDAYL KGLTDIDGEH LLNAALHSAK QEAFGLASYQ QLGFVPYTER
KWNVALTLEY AFDDWAIARL AKALGKEDIY QEFATRSQNY RRHFDAQTGF MRALDPHGQF
RLPFDPNAYH PEDYCEANAW QYSFFVPHDV AGMIEMMGGS AAVSAKLDAM FGTEQALDEF
PEWISGYIGQ YVHGNEPSHH VPYLYQYLGE AHKTQRLVRQ IMHELYTTAP DGLAGNEDAG
QMSAWYLFSA LGFYPVDPVS GEYVLGSPEV DSADIQLENG NVFKIRTINQ GPEHVYVKQV
TLNGKPLNGY ILRHSDILAG GELVFTMSPQ P
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