| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0284 |
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| Symbol | |
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| ID | 4602540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 331946 |
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| End bp | 333379 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639779613 |
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| Product | sodium/alanine symporter |
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| Protein accession | YP_926165 |
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| Protein GI | 119773425 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCG ACACTTCCTT TGATTTTGCC GCTGCCGCCG CCCGCTTTGC CGCCTTTGCC
TGGGGGCCAC ACATGCTGGT TCTGCTGGTG GGTGGCGGGC TGTTTTTCCT TATTTACTCT
GGGCTTGCGC CATTTCGTTA TTTAAAGCAT GCCATCGACA TAGTGCGAGG CAAGTACCCC
GAAGCCGATG CCGCAGGCAA TATCAGTCAT GCCGGGGCGC TGTCCAGCGC GATGGCGGGC
ACTGTGGGCA TGGGCAATAT TGGTGGGGTA GCGCTGGCGA TAGTCGCCGG TGGCCCCGGC
GCTATTTTTT GGATGTGGGT CAGCGCGCTG GTTGGCATGG CCACCAAGTT TTTTACCTGC
TCACTGGCGA TTATGTATCG CGGCACCGAT GAAACAGGGC GGGTGCGCGG TGGCCCCATG
TACATCATTA CCCACGGGCT TGGACAAAAA TGGAAGCCGC TGGCGGTGTT CTTTTGTCTG
GTGGGGCTGG TGGGTAATTT CCCGCTGTTC AACACCAATC AGCTGGTGCA AATCCTCAAG
GAATACCTGT TTTTATCCCC CGGCGACACG GGCGTTGCCG TGGGCAGTGG CGAGCATTTT
GCCCTGGAGC TGGGCCTGGG GCTCGCCATC ATGAGTCTGG TGGCGCTGGT GATCCTGGGC
GGGATTAAGC GGATAGCGGC GGTGGCCATC AGAGTGGTGC CTACCATGAT TCTGCTGTAC
GTGGGCTGCG CGCTTTATGT GATTTTAAGC CACCTTGGCG ATGTGCCCAT GCACCTGTGG
CGCATAGTGG AAGATGCCTT TTCGGTGCAG TCGGTGGCTG GGGGCATTTT GGGCACCATG
CTCACCGGGG TGAAGCGGGC CGCTTTTTCC AACGAGGCGG GCATAGGCAC TGAGGTGATG
GTACACGGCA ACGCCAAAAC CTCTGAGCCG GTGAAAGAAG GTCTGGTGGC CATGCTCGGC
CCCGCCATCG ACACCCTCTT GGTGTGCACG GCCACGGCGC TGATTATTCT TATCTCCGGC
GTGTGGGAGC AGGGCGGTGC CAATGGCATC AGCCTGTCCA GTGCGGCCTT TGCCGCCACC
ATGCCGGGCA TTGGCCCCTA TCTTTTACTG GTGTGTGTTA GCTTTTTTGC CATAACCACC
ATCTTCACCC AGGCCTTTTA TGGCAGCCAA TGCTTTGCGT TTTTGTTTGG CGCAAGGCGC
GAGCGCTGGT ACTTGTACCT GTATTTGCTG GCGATTTTAT TTGCCGCCAC CAACAGCCTC
ACCGACATAG TCAACATCAT CGACGGCGCC TACGGCCTGA TGGCCATCCC CACCATGACA
GCAGCCTTAC TGCTGGCGCC TCGGGTGCGC GCAGCGGCAA AGGATTACTT TCGCAGGTTG
CGCTCCCAAG GGGGCGAGTT GGTTGGCCGT GATGACCCTG TGGAGCGGCG CTGA
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| Protein sequence | MTADTSFDFA AAAARFAAFA WGPHMLVLLV GGGLFFLIYS GLAPFRYLKH AIDIVRGKYP
EADAAGNISH AGALSSAMAG TVGMGNIGGV ALAIVAGGPG AIFWMWVSAL VGMATKFFTC
SLAIMYRGTD ETGRVRGGPM YIITHGLGQK WKPLAVFFCL VGLVGNFPLF NTNQLVQILK
EYLFLSPGDT GVAVGSGEHF ALELGLGLAI MSLVALVILG GIKRIAAVAI RVVPTMILLY
VGCALYVILS HLGDVPMHLW RIVEDAFSVQ SVAGGILGTM LTGVKRAAFS NEAGIGTEVM
VHGNAKTSEP VKEGLVAMLG PAIDTLLVCT ATALIILISG VWEQGGANGI SLSSAAFAAT
MPGIGPYLLL VCVSFFAITT IFTQAFYGSQ CFAFLFGARR ERWYLYLYLL AILFAATNSL
TDIVNIIDGA YGLMAIPTMT AALLLAPRVR AAAKDYFRRL RSQGGELVGR DDPVERR
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