| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0278 |
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| Symbol | |
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| ID | 4602534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 323201 |
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| End bp | 326056 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639779607 |
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| Product | endonuclease |
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| Protein accession | YP_926159 |
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| Protein GI | 119773419 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTAA ATCCCACGGA ACAGAAAGTC TTAATTTTTG TACAGAATAT GCTTGAGGCA
GGAAGCCAGG TGACTCCAGC TATTATTCAG GAGCAGATAA ATCTTGTTCT GAATATGAAA
AAAGAGTGGA GAGCTGACAC TGATGAGAGC GCAGTCATTG ATGAGCTTAT CCGCAGAGCG
AGCACATGGG TTGGTGATGA TGCATTGCTG ACCAACGACG AAGGCCATAT TGCTTGGCTG
AACCAAGATC GTAAGCAAGG ATGGCGTTAC TGGCAGCGCT ACCGTGAGTA CCAGGAGAAA
AAACTATCTT GGAATATTGT TGAAGGACTG GATAAGTCAA CAGATCTGAT TCTTGGCAAT
CTTGAAGATC CAAAACGTCA GGGACCGTGG GATCGAAGAG GACTGGTAGT TGGACACGTG
CAGTCTGGTA AAACTGGCAA CTATACCGGT CTGATCTGCA AGGCGGCTGA TGCGGGTTAC
AAAATAATTA TTGTGCTTGC TGGCATGCAC AATAACCTTC GTTCCCAGAC TCAGATACGA
CTGGACGAGG GTTTTCTTGG CTTTACGACG AGTGTCATTC AAGATGAGAT GCACATTGTT
GGTGTGGGCG AGATTGACAG AGACCCGGCT ATACGACCAA ATTTTGCGAC CAACCGTTCG
GAAAAAGGTG ACTTTAATAC CAAGGCAGCA AAACATCTTG GTATATCCCC AGAAGAGCGC
CCTTGGTTGT TTGTTGTGAA AAAGAACAAA TCGGTTTTGG AAAGGCTGTT AAAGTGGATT
CAGGATCATG TTGCCAATAT TCAGGATCCT GAGACAGGCA GGAAACTGGT TACCCATCTT
CCTCTTTTGA TCATAGATGA TGAGGCGGAC AATGCATCGG TTGATACAGG CGACCAGGCT
TATGATGAGT TCGGTAAGCC TGATCTAGAG CATGAGCCTA CCGCCATAAA CCGGTTGACT
CGAAGAATAC TTCATAGCTT TACCCGCAAA GCTTATGTTG GTTATACGGC GACACCATTC
GCAAATATTT TCATTCACAA TCGAAGCGAG ACTGAGAAAG AGGGGCCAGA TCTCTTTCCT
TCAGCATTTA TTGCAAATCT TTCAGCTTCA TCCAGTTACA TCGGCCCTGC TAAAGTATTT
GGTCGCTCGA GCGAAAATGG CAGGGAAGGA GGTCTTCCTC TTGTTAAAGT AGTCAATGAC
CATTGCTCTG AAGATGAAAA ATCAGGCTGG ATGCCAACCA AACATAGAAA TGGTTATTAC
CCGTCAAGTG ACCAGCAGCA TGGTATTCCT GAGTCCCTAA GAGAGTCGGT CGATGCATTT
GTGCTTGCCT GTGCAGCGCG AAGGCTGAGG GGGCAGAAAG ATGAGCACTG CTCCATGCTG
ATACATGTCA CTCGATTCAC ATCCGTTCAG GGACATGTTA AAGAGCAGGT TGCGGCTTAT
GTTGATTGGC TAAAGAGGCG CTTGGTGCGA CGGATTGATC ATTATGACGT GATTAATCAA
CTCAAGCAGC TCTGGGAAAG TGACTTTCTG GCTACAACTG AAACCATTCA CTCTATGCAC
CCTGATATGG TGGATGAGAA TACGTTGACT TGGTCGCAAG TAGAAGCAGA ACTTTCGGAT
GCTATCTCAG AGATTGAAGT AAGAGCTATC AACGGTTTTG CGAAAGAAGC GCTTGATTAT
GCGGACAGTG CCGTAGGGCT TAAAGTCATT GCTGTCGGCG GAGATAAACT TGCCCGAGGA
CTGACACTTG AAGGACTGTG TGTCAGTTAT TTTCTTCGTG CATCCAGAAT GTACGATACA
TTGATGCAAA TGGGACGCTG GTTTGGTTAT CGCCCGGGAT ACCTTGACCT GTGTAGGCTG
TATACAACCA TTGATCTTGT GGAGTGGTTT GAACATATTG CTGATGCATC AGAAGAGCTG
CGTGAAGAGT TCGATCTGAT GACTGCCAGC GGTGCAACTC CAAAGGAGTA TGGTCTGAAG
GTAGCTTCGC ATCCTGTGCT GATGGTTACT TCTAGACTAA AAATGCGGAA CGCTCAAAGC
CTTTACCTTT CCTTCAGCGG TCAGTCTGTT GAAACTGTTT CTCTTTTGAA GGATTTAGAT
TCTCTGAAGT CTAACCTGCA AGCCTTTGAT CGCTTAACAT TACGCTTGGG TGAACCTAAG
CCGATTCCTG ATAGAAATCG GAATGGCAGC AAGAAGTCTG GTAATGGCGT TCAGTGGACT
AATGTGCCAG CTGAAGTGAT CGTGCAGTTT TTAAGTGAAT ACAAAACTCA TCCGGCTGCG
ATGAAGGTTA ACAGTAGGTT ACTTTCTGAC TTCATTCAGA ATATGAATAA AGAACATGAG
CTTACATCAT GGACTGTGGC AATAATTAAC GGTGGCCAAG AGCGAACATA CTCAATTTAT
GGTTCCAGCA GTGTTACAGT TAAATTGGTA AAACGTACCC CGAAAACGAT TACTGAGGAT
CGGTACTCAA TTGGAAGGCT TCTATCGCCA GCCGATGAAG CTCTTGACCT TGATGATGAT
GCTTGGGATG CAGCGTTGAA TGAAACCAGA AACAACTGGA AGAATGACCC AGCTCGGTCA
GAAAAATATA ATGGAGAGCC GCCAAAGGAG CCGAATGGCC CGGCTCTACG AAAGGTGAGA
GGGTTTGGTG CAGGCCACAT AGCCGGCCAT CCTGAGCGGG GGCTTTTGCT TATCTACTTG
CTGAGCCCTG AGGGAGTTGA TGACAGTTAT GATGAGAGTA CTGCACCAAT TGTGTCTTTT
GGTATCAGCT TCCCGGGAAG TGACAGCGGT ACAAAGGTTA AGTATGAAGT GAACAATGTA
CTCTGGGAGC AGGAATATGA CCCTTCTGTT TATTGA
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| Protein sequence | MALNPTEQKV LIFVQNMLEA GSQVTPAIIQ EQINLVLNMK KEWRADTDES AVIDELIRRA
STWVGDDALL TNDEGHIAWL NQDRKQGWRY WQRYREYQEK KLSWNIVEGL DKSTDLILGN
LEDPKRQGPW DRRGLVVGHV QSGKTGNYTG LICKAADAGY KIIIVLAGMH NNLRSQTQIR
LDEGFLGFTT SVIQDEMHIV GVGEIDRDPA IRPNFATNRS EKGDFNTKAA KHLGISPEER
PWLFVVKKNK SVLERLLKWI QDHVANIQDP ETGRKLVTHL PLLIIDDEAD NASVDTGDQA
YDEFGKPDLE HEPTAINRLT RRILHSFTRK AYVGYTATPF ANIFIHNRSE TEKEGPDLFP
SAFIANLSAS SSYIGPAKVF GRSSENGREG GLPLVKVVND HCSEDEKSGW MPTKHRNGYY
PSSDQQHGIP ESLRESVDAF VLACAARRLR GQKDEHCSML IHVTRFTSVQ GHVKEQVAAY
VDWLKRRLVR RIDHYDVINQ LKQLWESDFL ATTETIHSMH PDMVDENTLT WSQVEAELSD
AISEIEVRAI NGFAKEALDY ADSAVGLKVI AVGGDKLARG LTLEGLCVSY FLRASRMYDT
LMQMGRWFGY RPGYLDLCRL YTTIDLVEWF EHIADASEEL REEFDLMTAS GATPKEYGLK
VASHPVLMVT SRLKMRNAQS LYLSFSGQSV ETVSLLKDLD SLKSNLQAFD RLTLRLGEPK
PIPDRNRNGS KKSGNGVQWT NVPAEVIVQF LSEYKTHPAA MKVNSRLLSD FIQNMNKEHE
LTSWTVAIIN GGQERTYSIY GSSSVTVKLV KRTPKTITED RYSIGRLLSP ADEALDLDDD
AWDAALNETR NNWKNDPARS EKYNGEPPKE PNGPALRKVR GFGAGHIAGH PERGLLLIYL
LSPEGVDDSY DESTAPIVSF GISFPGSDSG TKVKYEVNNV LWEQEYDPSV Y
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