Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0266 |
Symbol | gmk |
ID | 4602522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 305313 |
End bp | 305936 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639779595 |
Product | guanylate kinase |
Protein accession | YP_926147 |
Protein GI | 119773407 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0194] Guanylate kinase |
TIGRFAM ID | [TIGR03263] guanylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACTC GTGGAAATCT TTTTATCGTA TCGGCCCCCA GCGGTGCCGG AAAGTCTTCG CTGATATCAG CCCTGCTGAA AGATAAACCC GCCGACAAGC AGGTTTCTGT GTCTCACACT ACCCGCAAAC CGCGTCCGGG CGAAGAAAAC GGCGTGCATT ATCACTTTGT CAGCGTGGAT GAATTTAAAG CGCTGATCGC GCAGGATGCT TTTTTTGAGT GGGCCGAAGT CTTTGGCAAC TTTTATGGCA CCTCACGCCT TACGGTGCAG GCAACTCTGG AGCGCGGCAT CGATGTGTTT TTGGATATCG ACTGGCAAGG CGCCCAGCAG GTGAAAAAAC TCATGCCAGA GGCCATGGGG ATTTTTATTC TGCCACCGAG CCGTGAAGAG CTGGAGCGCC GCCTTATTGG CCGCGGCCAG GACAGTGATG AAGTGATTGC TTCACGCATG GCACAGGCCG TGTCTGAAAT GTCCCATTAC ACTGAATATG AGTATGTTAT CGTTAACGAT AACTTTGATG AGGCCCTGGC CGATTTGCAG GCTATCATCC GTGCGGGGCG CTTAACCTGC GCTGGTCAAG CCCGCACCCA CGGTGATATG CTTAAGGGTC TGTTGGCAGA CTGA
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Protein sequence | MSTRGNLFIV SAPSGAGKSS LISALLKDKP ADKQVSVSHT TRKPRPGEEN GVHYHFVSVD EFKALIAQDA FFEWAEVFGN FYGTSRLTVQ ATLERGIDVF LDIDWQGAQQ VKKLMPEAMG IFILPPSREE LERRLIGRGQ DSDEVIASRM AQAVSEMSHY TEYEYVIVND NFDEALADLQ AIIRAGRLTC AGQARTHGDM LKGLLAD
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