| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0264 |
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| Symbol | |
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| ID | 4602520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 302833 |
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| End bp | 304932 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639779593 |
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| Product | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase |
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| Protein accession | YP_926145 |
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| Protein GI | 119773405 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTATCTGT TTGAAGGTTT AAAGGAATCG GCTTCCGCTT ACCTCGACAG CGGCCAAGTG
GCATTACTCA AACAGGCTTA TCAGGTCGCC CGCGATGCCC ATGAAGGGCA GATGCGCACC
AGCGGCGAAC CTTACATCAC CCACCCGGTT GCTGTAGCCA AGATTCTGTC CGACATGCGC
CTCGACCACG AGACGCTGAT GGCAGCCCTG CTGCACGACA CCATTGAAGA TACCCACGTC
ACCAAGGAAG ATCTCGCAGA GCTGTTTGGC GATGCGGTGG CCGATCTGGT TGAAGGGGTG
TCGAAGCTCG ATAAGCTCAA ATTCCGCGAT AAAAAAGAAG CCCAGGCGGA AAACTTCCGC
AAGATGATGA TGGCCATGAC CCAGGATATC CGGGTTATCC TCATCAAGCT GGCTGACCGC
ACCCATAACA TGCGCACACT CGGCGCTTTG CGTCCGGACA AACGCCGCCG CATCGCCCGG
GAAACCCTGG AAATTTACGC CCCCATTGCC AACCGCCTCG GTATTCACAA TATCAAGACA
GAGCTGGAGG ATTTGGGCTT TCAGGCGTAT TACCCCATGC GCTACCGGGT GCTCAAAGAA
GTGGTCAAGG CTGCCCGCGG TAACCGCAAA GAGCTTATTC AAAACATTAA AACCGGCATC
CAGGCACGAC TGGAAGATGC AGGTATTCAT GCCAAGGTCA AAGGCCGGGA GAAAAACCTT
TACTCCATCT ACAACAAGAT GCGCGGTAAA GAGTTACAGT TTCAGGAAGT CATGGATATC
TATGCCTTCC GGGTCATAGT AGATTCCATC GATACCTGCT ATCGGGTGCT GGGGGCCATG
CATGGCCTGT ACAAGCCGCG TCCCGGTCGC TTCAAAGACT ATATTGCCAT TCCCAAGGCC
AACGGCTATC AGTCGCTGCA CACGTCTCTG TTTGGTCCCC ACGGTGTACC GGTGGAAATT
CAAATCCGTA CCGATGACAT GGATCAAATG GCCGACAAAG GGGTTGCGGC CCACTGGGTA
TACAAAAACG GTAACGAAAA CGGCAGCACC ACCACTCAGG TGAGGGCCCG CAAATGGATG
CAGAGCCTGC TGGAACTTCA GCAAAGCGCC AGCTCCTCCT TCGAGTTTGT GGAAAACGTT
AAAACCGAGC TCTTCCCCGA CGAAATTTAT GTGTTTACCC CCGAAGGCCG CATCCTCGAG
CTGCCGGTGG GTGCCACCGC GGTGGACTTT GCCTACGAGG TTCACACAGA CGTGGGTAAT
ACCTGCGTGG GTGCCCGGGT AAACCGCCAG GCATATCCGC TCAGCCAACC ACTAATCTCT
GGCCAAACCG TTGAAATTAT TACGGCAAAA GGCGCCAAGC CCAATGCCGC CTGGCTCAAC
TTTGTGGTGA CAGGAAAGGC GCGCGCCAAA ATTCGTCAGG TACTGAAAAA CCTCAAGCAG
GATGAAGCCA TTGCACTGGG CCGCCGCTTG CTTAACCACG CCCTGGGTGA AAACAAACTC
GACAGCGTGG CGCCGGAGCT GCTCGATAAA GTTATTCAGG AAACCAAGCA CAAGGATTTG
AACAGCCTGC TGGCCGACAT AGGTTTGGGC AATGCCATGA GCATAGTCAT CGCCCAGCGT
CTGACCGGTG GCGCCGTGCC AGAAAAGCAA AGCGAAACCC ATCTGATGCC AATCCGCGGC
GCCGAAGGCA TGCTGGTGTC CTTCGCCAAG TGCTGCCACC CCATCCCGGG CGATGCGGTA
ATTGCCCACG TGAGCCCCGG CAAGGGTCTG GTGGTACACA TGGAAAACTG TGCCAACATT
CGCGGCTATC AGGGCGAGCC TGACAAGTAC ATCCCTGTGC ATTGGGATAA GGTTGACGGC
GTGGAATACC AGGCCAACCT GAGGGTAGAA ATCGTTAACC ATCAGGGTGC GCTGGCCAAG
ATCACTTCCA TTATCGCCAG CGAAGGGTCC AACATTCATA ACCTCAGCAC CGAAGAGCGT
GATGGTAGGG TGTATTTGAT TAACCTGCGG ATTTCTGTGC GGGATCGTAT TCACCTTGCC
AACGTGATGC GCCGTATCCG GGTTCTGCCC GAGGTGCTGA GAACCTCCCG CAATCGTTAG
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| Protein sequence | MYLFEGLKES ASAYLDSGQV ALLKQAYQVA RDAHEGQMRT SGEPYITHPV AVAKILSDMR
LDHETLMAAL LHDTIEDTHV TKEDLAELFG DAVADLVEGV SKLDKLKFRD KKEAQAENFR
KMMMAMTQDI RVILIKLADR THNMRTLGAL RPDKRRRIAR ETLEIYAPIA NRLGIHNIKT
ELEDLGFQAY YPMRYRVLKE VVKAARGNRK ELIQNIKTGI QARLEDAGIH AKVKGREKNL
YSIYNKMRGK ELQFQEVMDI YAFRVIVDSI DTCYRVLGAM HGLYKPRPGR FKDYIAIPKA
NGYQSLHTSL FGPHGVPVEI QIRTDDMDQM ADKGVAAHWV YKNGNENGST TTQVRARKWM
QSLLELQQSA SSSFEFVENV KTELFPDEIY VFTPEGRILE LPVGATAVDF AYEVHTDVGN
TCVGARVNRQ AYPLSQPLIS GQTVEIITAK GAKPNAAWLN FVVTGKARAK IRQVLKNLKQ
DEAIALGRRL LNHALGENKL DSVAPELLDK VIQETKHKDL NSLLADIGLG NAMSIVIAQR
LTGGAVPEKQ SETHLMPIRG AEGMLVSFAK CCHPIPGDAV IAHVSPGKGL VVHMENCANI
RGYQGEPDKY IPVHWDKVDG VEYQANLRVE IVNHQGALAK ITSIIASEGS NIHNLSTEER
DGRVYLINLR ISVRDRIHLA NVMRRIRVLP EVLRTSRNR
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