| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0261 |
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| Symbol | |
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| ID | 4602517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 299560 |
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| End bp | 301215 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779590 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_926142 |
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| Protein GI | 119773402 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000998406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCA CTATCAAGAC TCCTGTAGAG ATGCTCGACC ATTGGGTACA AAACCAGGGT
GACAAGGTTT ACTTGCGCCA GCCGGTAAAC GGCCAATACC GTGATTTCAG CTGGCGGGAT
GTGAAACGCC AGATGGAGCA AATTGCCGGC TCGCTCAGGC ATCTTGGTCT TGTGCCCGGA
GACAAGGTCG CCGTGCTGTC CAAGAACTGC GCCGAGTGGT TTATTACCGA CCTGGCGTTA
ATGCACGGCG GTTATATCAG CGTACCCATT TATCCTACCG CCAATGCCGA TACCATCCGC
TACGTGCTGG AGCACAGTGG TGCCAAGGCC ATTTTTATCG GCAAGCTGGA CCACTGGGCC
GAGCAGGAAG CCGGTGTTGG CGGCAGTATT TTGCGCATGT CCTTCCCCTA CGACACCATG
CCGACCCAAT ACGGCTGGGA CCAGTTGATG ACCATGGGAC AACCGCTGAC AGACGCACCG
CTGCCTGCCA TGGAAGATAC CATGACGCTG ATTTACACCT CGGGCTCCAC TGGCAGCCCG
AAGGGTGCAA TTCAAACCTT TGGCAGCTAT TGCTGGACCT GTACTGCCGT GGTGCGCGAT
CTCAAAACCG ACGGTGACGA TAGATTGCTG TCGTACCTGC CACTGGCCCA TATCACCGAG
CGGGTCGCCA TTGAAGGGTC ATCCTTCTAT TCCGGCAGCG CGGTGGCCTT TGTCGAGAGT
CTGGATACCT TCGTCGCCGA CGTGCAGCGC ATGCGACCAA CCGTATTCTT CTCGGTGCCA
CGTCTTTGGA CCCTGTTCCA GAAAAACATT ATCGACAAGG TGGGTTTCGA CAAGCTCAAC
TTCCTGCTCA AGCTGCCCCT CATCAGCTAT CTGGTAAAAC GCAAAATTCA CAAGGGACTT
GGCCTGGATA AGTGCCGCTT GCTGGGCTCA GGTTCTGCGC CTATCCCGCC ATCACTCATT
CAGTGGTACC ACAGCATAGG GCTGAATATC TGCGAAGCCT GGGGCATGAC CGAAAACTGT
GCCTACTCCA TCATCAATTA TCCCTTTGAT GCCAGCAAAA TCGGTACCGT GGGAAAGCCG
GTGGAAGGCT GCCTGGTGCG CCGCAGCGAA AGCGGTGAAC TCATGGTCAA GAGTCCCGGG
CTGATGAGTG GCTACTACCA GCAGCCCGAA GCCTCCGCTG CCGCCTTCGA TGAAGATGGC
TTTTTCCACA CCGGCGATCT CTGCGCCATC GATGAAGATG GTTGCGTCAG CATCACCGGC
CGGGTGAAAG ACAACTTTAA AACCGCCAAG GGCAAGTACG TGGCCCCAGT GCCTATCGAG
CGCAAGCTGG CTCAGGATCC CCATGTGGAG CTGATTTGCG TGATTGGCTC GGGTCTGCCC
CACCCCATCG CACTGGTGCA ACTGTCAGAC GGTGCCACCC TGCAAGCCCG GGAAGAGGTT
CGCGCTTCCA TCAAGGCCAC CCTGGATGCG GTGAATCCTC ATCTGGAATC CCACGAAACC
GTGGATGCCG TGGTGGTAGT CAACGCCCCC TGGACCATTG AAAACGATGT GCTCACCCCA
ACGCTGAAAA TCAAACGCCA TGTGCTGGAA GCCAGATACA GTGCCAAGGT AGATGGCGTT
CGTGGTGCCA AGGTGGTGTG GGAAGACGAG ATTTAA
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| Protein sequence | MQATIKTPVE MLDHWVQNQG DKVYLRQPVN GQYRDFSWRD VKRQMEQIAG SLRHLGLVPG
DKVAVLSKNC AEWFITDLAL MHGGYISVPI YPTANADTIR YVLEHSGAKA IFIGKLDHWA
EQEAGVGGSI LRMSFPYDTM PTQYGWDQLM TMGQPLTDAP LPAMEDTMTL IYTSGSTGSP
KGAIQTFGSY CWTCTAVVRD LKTDGDDRLL SYLPLAHITE RVAIEGSSFY SGSAVAFVES
LDTFVADVQR MRPTVFFSVP RLWTLFQKNI IDKVGFDKLN FLLKLPLISY LVKRKIHKGL
GLDKCRLLGS GSAPIPPSLI QWYHSIGLNI CEAWGMTENC AYSIINYPFD ASKIGTVGKP
VEGCLVRRSE SGELMVKSPG LMSGYYQQPE ASAAAFDEDG FFHTGDLCAI DEDGCVSITG
RVKDNFKTAK GKYVAPVPIE RKLAQDPHVE LICVIGSGLP HPIALVQLSD GATLQAREEV
RASIKATLDA VNPHLESHET VDAVVVVNAP WTIENDVLTP TLKIKRHVLE ARYSAKVDGV
RGAKVVWEDE I
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