| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0255 |
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| Symbol | |
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| ID | 4602511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 292656 |
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| End bp | 293807 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639779584 |
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| Product | acetylornithine deacetylase |
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| Protein accession | YP_926136 |
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| Protein GI | 119773396 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGTCA TTCCAGATCT CAAGAGTCGT TTCTCCTCGC TCATTTATGC ACCATCAATC
AGTGCAACCG AACCACAACT GGATATGAGT AATCATTCAG TTATCGCCCT GCTGAACGAC
TGGTTTTCGG ATCTGGGATT TGACTGTCAA GTAACAAAGG TAGCAGGCAC CCGCGACAAA
CGGAATTTGC TGGCTAAAAT CGGTAGCGGT GAAGGTGGCC TGCTATTGGC AGGACACACT
GACACCGTGC CTTTTGACGA AGGCCGCTGG AGCCAGGATC CCTTTGTACT GACCGAAAAG
GACGACCGTT GGTACGGCCT TGGCAGTTGC GACATGAAAG GTTTTTTTGC GCTGATCCTT
GAAGCGGCGA AAGATTTACC CCTGCATAAC CTGCAAAAGC CGCTTTATAT CTTTGCCAGC
GCCGATGAAG AAACGACTAT GGAAGGCGCC AAAGCGTTTG CGGCCAATAC CGGCATTCGC
CCCGAGTACG CCATCATTGG CGAACCCACA GGCCTTAAAC CCGTGTATAT GCACAAAGGC
CATCTGGCTC AGGGGATACG CATTACGGGC CGCAGCGGCC ATTCATCCGA TCCCGCCCGT
GGTCTCAATG CCATCGAAAT CATGCACAAG GTCATTGGGC AGTTGCTGAA GCTCAAACAA
CACCTGGCCG ACAATTACCG TGAAGACGCC TTCAGCGTGC CGTACCCCAC CATGAACTTT
GGCCATATTC ACGGCGGCGA TGCCGCCAAC CGAATTTGCG GCTGTTGTGA TTTGCATTTG
GACATTCGCC CGCTGCCGGG ATTGGCGCTG GAGGATTTAG AGCTGATGCT TGTCAACTAT
CTGCAGGACA TTACTCGCGA CTATCCCGGT TCAGTTGACA TCCGCACCCT CTATCCGGGC
AGCGAAGCCT TTGCCGGGGT AAAAGACAGT GCCTGGACCC AACTGGTGGA AAGTCTCTCA
GGTCAACAGG CTGAAGTGGT GAACTACGCC ACCGAAGCCC CTTACATCAA TAAACTGGGC
TGCCAAACCC TGGTTTTGGG GCCGGGAAGC ATCAACCAGG CCCATCAGCC AGATGAATAT
ATGGCAATGG ACCAGTTAAA ACCCACGGTA GAATTATTGA AACAGTTGAT CCATAAGGCC
TGTATTCAAT AA
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| Protein sequence | MKVIPDLKSR FSSLIYAPSI SATEPQLDMS NHSVIALLND WFSDLGFDCQ VTKVAGTRDK
RNLLAKIGSG EGGLLLAGHT DTVPFDEGRW SQDPFVLTEK DDRWYGLGSC DMKGFFALIL
EAAKDLPLHN LQKPLYIFAS ADEETTMEGA KAFAANTGIR PEYAIIGEPT GLKPVYMHKG
HLAQGIRITG RSGHSSDPAR GLNAIEIMHK VIGQLLKLKQ HLADNYREDA FSVPYPTMNF
GHIHGGDAAN RICGCCDLHL DIRPLPGLAL EDLELMLVNY LQDITRDYPG SVDIRTLYPG
SEAFAGVKDS AWTQLVESLS GQQAEVVNYA TEAPYINKLG CQTLVLGPGS INQAHQPDEY
MAMDQLKPTV ELLKQLIHKA CIQ
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