| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0252 |
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| Symbol | |
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| ID | 4605923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 288026 |
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| End bp | 289300 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639779581 |
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| Product | competence/damage-inducible protein CinA |
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| Protein accession | YP_926133 |
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| Protein GI | 119773393 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1058] Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
[COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
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| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain
[TIGR00199] competence/damage-inducible protein CinA C-terminal domain
[TIGR00200] competence/damage-inducible protein CinA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTG AGATGATTTG CACCGGTGAA GAGGTGCTGG CAGGACAGAT AGTGGATACG
AACGCTGCCT GGTTTGCCAA TCTGATGATG GAAAACGGTA TTGAGGTACA GCGCCGGGTC
ACTGTGGGTG ACAGGCTCGA GGACCTTGTG GCAGTGTTTC AGGAGCGCAG TCTCCATGCA
GATGTGATCC TGGTCAATGG CGGTCTGGGC CCGACTTCTG ATGATATGTC GGCTGAAGCC
ATGGCCAAAG CCAAGGGAGA ATCCCTGGTA GAGAATGCTG AGTGGGCTGA ACGTCTACAC
GATTGGTTTA CCCGCCATGG CCGTGAGATG CCAAAGAGCA ATATCAAGCA GGCTTGGCTG
CCAGAGTCCG CCGTGATGGT GGATAACCCT GTCGGTACCG CTTGTGGCTT CAGGGTTAAG
CTTAACCGCG CCTGGCTGTT CTTCACTCCA GGAGTGCCGT TTGAATTCAA GCAAATGGTC
GAAGAGCAGT TTCTGCCATT CGTTAAAGCG ACCTTCGATG CTGGTAGTCA GGTAGCGCTG
CGTAAGTTGC TGACCCTGGG GCGAGGTGAA TCCTCATTGG CTGATGAGCT GGAAGCGATG
GCGCTGCCTG CAGGCATTAC TCTGGGTTAC CGCTCCTTTA TGCCTTATAT CGAAATCAAG
GTATTTGCCC GTGGCGTTGA GGCCATTAAG GCACTTGGGG CTGTGACTGA TGAAATAGCA
GCACGGCTGG GTAATGTGGT TGTTGCACAC AACCGTACTT CTTTGGAAGA AGAGATCCAC
GCCAGATTGA ACAACTCAGG TATAAGCCTC AGTGTGGCTG AGTCCTGTAC CGGTGGCCTT
ATTACCAGTC AGTTGGTTGG CTTTCCCGGC AGTTCTTCAT ACTTGCATCA GGGATTGGTG
ACTTATAGCA ACGAGTCCAA GGTGAGGGTG CTTGGTGTAT CACCCCAGAC ACTGGATGAC
TACGGCGCTG TGTCTATTCA AACTGTTGAG GAGATGGCTA AGGGGGCTCG TGCTATTTTG
GATAGCGACT TTGCGCTGGC TACCAGTGGA ATCGCTGGCC CTGATGGTGG TACAGAGGAA
AAGCCGGTTG GCACAGTGGC GATAGCGCTT GCCACCAAGG GTGGTGTTTA TAGCCAGATG
GTGAAATTGC CGCGTCGCTC CCGTGATATG GTGCGTAAGG TGAGTGCTGC GGTAGCCTAT
GACATGCTGC GCCGTGAGCT TAATGGCGAA GCCGTGATTG TGGACTACAG TTCCATCAGC
CGTTATCCCA AGTAA
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| Protein sequence | MKLEMICTGE EVLAGQIVDT NAAWFANLMM ENGIEVQRRV TVGDRLEDLV AVFQERSLHA
DVILVNGGLG PTSDDMSAEA MAKAKGESLV ENAEWAERLH DWFTRHGREM PKSNIKQAWL
PESAVMVDNP VGTACGFRVK LNRAWLFFTP GVPFEFKQMV EEQFLPFVKA TFDAGSQVAL
RKLLTLGRGE SSLADELEAM ALPAGITLGY RSFMPYIEIK VFARGVEAIK ALGAVTDEIA
ARLGNVVVAH NRTSLEEEIH ARLNNSGISL SVAESCTGGL ITSQLVGFPG SSSYLHQGLV
TYSNESKVRV LGVSPQTLDD YGAVSIQTVE EMAKGARAIL DSDFALATSG IAGPDGGTEE
KPVGTVAIAL ATKGGVYSQM VKLPRRSRDM VRKVSAAVAY DMLRRELNGE AVIVDYSSIS
RYPK
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