| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0250 |
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| Symbol | |
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| ID | 4602506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 274365 |
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| End bp | 274868 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639779571 |
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| Product | cytochrome c-type biogenesis protein CcmH |
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| Protein accession | YP_926131 |
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| Protein GI | 119773391 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes |
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| TIGRFAM ID | [TIGR03147] cytochrome c nitrite reductase, accessory protein NrfF |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000345398 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0777875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCAT TAAACCTGTT GTTGGCAATG GTGCTGTTCT GTATCAGCAC CCTGACATTC
GCAACGCCGG TGGACACCTA TGAATTTAAG TCTGCCGACA ATCAAAAGCG TGCTTTGTCG
CTTGCACATG AATTGCGCTG TCCACAGTGT CAAAACCAAA ACCTCATCGA CTCCAACTCA
CCGGTTGCCC GCGACCTGCG TCTGGAAGTT TACAAGATGG TGGACGAAGG CAAGTCAGAC
GATCAGATTA TCGAGTTTAT GACCACCCGC TATGGTGACT TCGTGCTCTA TAAGCCAAGG
GTCGAAGGGC GGACTTATAT CCTGTGGCTC GGACCAGTAG CACTGCTGTT GATTGGCTTG
ATGGTGGTAA TACTATTCAT CCGTAAACAA CGCAGTCAAA CAGCCGATGC TGCCGATTTG
ACCCCTGAGC AGCAGGCAGA ACTCGATGCC TTGCTGAAAG GTAGCCAGCC CGAAGCCGAT
AACGGCAAGG GTAAAAAATC ATGA
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| Protein sequence | MKPLNLLLAM VLFCISTLTF ATPVDTYEFK SADNQKRALS LAHELRCPQC QNQNLIDSNS
PVARDLRLEV YKMVDEGKSD DQIIEFMTTR YGDFVLYKPR VEGRTYILWL GPVALLLIGL
MVVILFIRKQ RSQTADAADL TPEQQAELDA LLKGSQPEAD NGKGKKS
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