Gene Sama_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0246 
Symbol 
ID4602502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp269706 
End bp269999 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content53% 
IMG OID639779567 
Productcytochrome c 
Protein accessionYP_926127 
Protein GI119773387 
COG category[C] Energy production and conversion 
COG ID[COG3245] Cytochrome c5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00117918 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0109237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TGTTAGCAAT GACTGCAGTA GCTGCTCTGA CTATGGCTGC CAGCGTATCT 
GCCCAAGAAG GTGAAGCTGT ATATAACAAG GCTTGCCAGG TATGTCACAG CATGGGCGTA
GCCGGTGCCC CTAAGGCTCA CGATGCTGCC CAGTGGGAAC CTCGTCTGGC CAAAGGTATC
GATGCGCTGC TGACCAGCGT TAAAGGTGGT CTGAACGCTA TGCCTCCAGG CGGCATGTGC
ACTGACTGTA CCGACGAAGA CTACAAGAAC GCCATCGAGT TCATGTCCAA GTAA
 
Protein sequence
MKKLLAMTAV AALTMAASVS AQEGEAVYNK ACQVCHSMGV AGAPKAHDAA QWEPRLAKGI 
DALLTSVKGG LNAMPPGGMC TDCTDEDYKN AIEFMSK