| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0245 |
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| Symbol | |
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| ID | 4602501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 268742 |
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| End bp | 269395 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639779566 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_926126 |
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| Protein GI | 119773386 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000419227 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00343887 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACACTAC CAACAAAAAC AGCCCACTCA CTGGTATCCG CCGAAAAGCT GACTTGCATT
CGTGAAGAAA GGATCCTCTT TGACGAACTG AGTTTCAGTG TGAACGAAGG CGATATCATC
CAAATTGAAG GCCCCAATGG CGCGGGCAAA ACCAGCTTGC TGCGCATCCT TGCAGGACTC
TCCCGCCCTT ACGCCGGCAG TGTGTTTTAC CGCGACGAAG AAATTGGCCG TTGCCGCGAT
GAATTTAACG AAGACCTACT TTATTTAGGC CATTTGGCGG GTGTCAAAAG CGAGCTGACA
GCCGAAGAGA ACCTTAACTT CAATTTAAGG CTCAGTGGCT ATGATGATTT CGACACCGGC
GAGGTCCTCG CCAAGGTCAA TCTGAAGGGA TTTGAAGAAG CGCTTGCAGG TCATTTATCT
GCGGGGCAGC ACAGACGCAC CGCGCTTGCA CGGCTTTGGC ACAGCAACTG TAAAGTGTGG
ATCCTGGACG AGCCTTTTAC CGCCATTGAC AAACGCGGCG TTGCTGAGCT TGAACAACTG
TTTCTCAAGC ATGCCGATAA CGGCGGCTGT GTGATCCTGA CGACTCACCA GGATATGGGA
CTCATCAAGG ATGAGCGGCT TCGCAAACTC AAGCTTGAGT ACAGGTTCGT ATAA
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| Protein sequence | MTLPTKTAHS LVSAEKLTCI REERILFDEL SFSVNEGDII QIEGPNGAGK TSLLRILAGL
SRPYAGSVFY RDEEIGRCRD EFNEDLLYLG HLAGVKSELT AEENLNFNLR LSGYDDFDTG
EVLAKVNLKG FEEALAGHLS AGQHRRTALA RLWHSNCKVW ILDEPFTAID KRGVAELEQL
FLKHADNGGC VILTTHQDMG LIKDERLRKL KLEYRFV
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