| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0241 |
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| Symbol | |
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| ID | 4602497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 266611 |
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| End bp | 267099 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639779562 |
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| Product | cytochrome c-type biogenesis protein CcmE |
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| Protein accession | YP_926122 |
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| Protein GI | 119773382 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2332] Cytochrome c-type biogenesis protein CcmE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0554704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000102983 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCCAA GACGTAAGAA AAGACTGGCC CTTGTCGTAG GTCTGATTGG TGGTGTGGCA
GCGGTGGCTT CTTTGCTGCT GTATGCACTG AATACCAACC TTAACCTGTT CTATACCCCA
ACTGAAATCG CTCACGGAAA AGCAGACACT GGCATCAAAC CTGAAGTGGG GCAGCGTATT
CGTGTAGGTG GTATGGTGAC TGTTGGCTCC ATGATCCGTG ACCCCAACAG CCTCCACGTT
GAATTTGCAG TTCACGATGC TGGCGGCGGT GAAGTGATTG TGACTTATGA TGACCTGCTG
CCGGATCTCT TCCGTGAAGG CCAGGGCATT GTAGCCCAGG GCGTTTTGAC CGAAGACGGT
AAACTGCAGG CCAGTGAAGT GCTCGCCAAA CACGACGAAA ACTACATGCC GCCTGAAGTC
GCTGAAGCCA TGGGTAAAAA CCATGAGAAG CTGGAATATA CCGAGACACA GAAAGGCGGT
TCACGCTAA
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| Protein sequence | MNPRRKKRLA LVVGLIGGVA AVASLLLYAL NTNLNLFYTP TEIAHGKADT GIKPEVGQRI
RVGGMVTVGS MIRDPNSLHV EFAVHDAGGG EVIVTYDDLL PDLFREGQGI VAQGVLTEDG
KLQASEVLAK HDENYMPPEV AEAMGKNHEK LEYTETQKGG SR
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