| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0233 |
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| Symbol | secY |
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| ID | 4602489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 261048 |
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| End bp | 262388 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639779554 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_926114 |
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| Protein GI | 119773374 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000181445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000105897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGCAAAAC CAGGACTTGA TTTAAAAAGC GCGAAGGGCG GTCTGTCAGA ACTGAAAGCC
CGTCTCCTGT TCGTGATTGG TGCAATTATC GTGTTTCGTG CCGGTTCATT TGTACCAATT
CCTGGTATTG ACGCAGCTGT ATTAGCAGAG CTGTTTGCTC AACAAAAGGG AACCATCCTG
GGCATGTTTA ACATGTTCTC GGGTGGTGCC CTTGAGCGTG CCTCAATATT CGCATTGGGT
ATCATGCCGT ACATTTCGGC ATCGATCATT ATGCAGTTAT TGACTGTAGT GCACCCCGCA
CTTGCCGAAC TGAAAAAGGA AGGTGAGTCT GGACGTCGCA AAATCAGTCA ATACACCCGT
TGGGGTACCC TGGTGTTGGG TACATTCCAG TCGGTCGGTA TTGCAACCGG TCTGCCAAAC
CTGGTTCCAG GTCTGGTAGT GAATCCAGGT TTTGGGTTCT ATTTCGTTGC AATCGTAAGC
TTGGTTACCG GGACTATGTT CCTGATGTGG CTGGGTGAAC AGATTACCGA GCGTGGCATT
GGTAACGGTA TTTCGATCCT GATTTTCGCA GGTATCGTAG CCGGCCTGCC ATCGGCTATC
GGCCAAACGG CCGAACAGGC GCGTCAAGGT GATTTGAACG TATTGGTATT GTTGTTGATT
GGCGTGATAG TATTCGCCGT TACCTATTTT GTGGTGTTTG TGGAGCGTGG CCAGCGTCGT
ATCGTCGTGA ACTACGCCAA GCGTCAGCAA GGAAATAAAA TCTTTGCTGC CCAATCCACT
CACTTGCCGC TGAAGGTGAA CATGGCGGGT GTCATCCCCC CAATCTTTGC GTCCAGCATC
ATTCTGTTCC CTGGAACCCT GGCTCAGTGG TTCGGTCAGA ATGAGGCCCT GTCTTGGCTC
AGCGATATTT CTCTGGCCGT AAGCCCCGGG CAGCCGCTGT ACTCACTGCT TTATGCAGCA
GCAATTATCT TCTTCTGCTT CTTCTATACC GCGCTGGTGT TTAACCCACG TGAGACAGCA
GACAATCTGA AGAAGAGTGG TGCGTTCATT CCCGGGATCC GTCCTGGCGA ACAGACCTCG
CGTTACATTG ATAAAGTGAT GACCCGACTG ACTCTGGCAG GCGCGTTATA CATTACCTTT
ATCTGTTTGA TTCCGGAGTT CATGCTCATC GCCTGGAAAG TACAGTTCTA TTTTGGCGGT
ACTTCCCTGT TGATTATGGT GGTAGTGATC ATGGACTTCA TGGCTCAGGT TCAGACCCAT
ATGATGTCTC ATCAATATGA GTCTGTAATG AAGAAAGCTA ACCTTATCAA CAAAGCGAAT
CTCGATCGCT TTGGCCGATA A
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| Protein sequence | MAKPGLDLKS AKGGLSELKA RLLFVIGAII VFRAGSFVPI PGIDAAVLAE LFAQQKGTIL
GMFNMFSGGA LERASIFALG IMPYISASII MQLLTVVHPA LAELKKEGES GRRKISQYTR
WGTLVLGTFQ SVGIATGLPN LVPGLVVNPG FGFYFVAIVS LVTGTMFLMW LGEQITERGI
GNGISILIFA GIVAGLPSAI GQTAEQARQG DLNVLVLLLI GVIVFAVTYF VVFVERGQRR
IVVNYAKRQQ GNKIFAAQST HLPLKVNMAG VIPPIFASSI ILFPGTLAQW FGQNEALSWL
SDISLAVSPG QPLYSLLYAA AIIFFCFFYT ALVFNPRETA DNLKKSGAFI PGIRPGEQTS
RYIDKVMTRL TLAGALYITF ICLIPEFMLI AWKVQFYFGG TSLLIMVVVI MDFMAQVQTH
MMSHQYESVM KKANLINKAN LDRFGR
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