| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0218 |
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| Symbol | rplV |
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| ID | 4602474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 254938 |
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| End bp | 255270 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639779539 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_926099 |
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| Protein GI | 119773359 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000966371 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000708625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGAAGTTT TAGCTAAACA TCGTTTTGCC CGTACGTCGC CTCAGAAGGC TCGCCTGGTC
GCTGATCAGA TCCGCGGTCT GCCTGTTGCC AAGGCCCTGG AGATTCTGAC TTTCAGCCCG
AAAAAGGCTG CCGTACTGGT TAAGAAAGTC GTTGATTCTG CTATCGCCAA CGCCGAGCAC
AACGAAGGCG CTGACATTGA CGATCTGAAA ATCGCCAAGG TTTTCGTTGA CGAAGGCCCA
ACTATGAAGC GCATCATGCC ACGTGCCAAA GGCCGTGCTG ATCGTATCAT CAAGCGTACC
AGCCACATCA CTGTGGTTGT ATCAGATCGC TAG
|
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| Protein sequence | MEVLAKHRFA RTSPQKARLV ADQIRGLPVA KALEILTFSP KKAAVLVKKV VDSAIANAEH
NEGADIDDLK IAKVFVDEGP TMKRIMPRAK GRADRIIKRT SHITVVVSDR
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