| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0216 |
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| Symbol | rplB |
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| ID | 4602472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 253804 |
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| End bp | 254628 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779537 |
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| Product | 50S ribosomal protein L2 |
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| Protein accession | YP_926097 |
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| Protein GI | 119773357 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0090] Ribosomal protein L2 |
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| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000116204 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000865154 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCAATTG TTAAGTGTAA GCCTACTTCT CCAGGTCGTC GTGGCGTTGT TAAGATCGTT
AACAGCGATC TGCACAAAGG CAAGCCTTTC GCTGGCCTGC TGGCCAAGAA GTCCAAGACC
GGTGGTCGTA ACAACACTGG TCGTATCACT ACCCGTCACG TTGGTGGTGG TCACAAGCAA
CACTACCGTC TGATCGATTT CAAGCGTAAC AAAGACGGTA TCCCAGGTAA GATTGAGCGT
CTGGAGTACG ATCCAAATCG TACCGCCAAC ATTGCTCTGG TTCTGTATGC AGACGGTGAA
CGTCGTTACA TCCTGGCTGC CAAAGGCATG CAGGCTGGCG ACAAAGTCGT TTCTGGCATT
GATGCAGACA TCAAAGTGGG TAACGCTCTG CCACTGCGCA ACATCCCTGT GGGTTCTGTT
GTTCACGCCG TGGAAATGAA GCCTGGCAAA GGCGCCCAGA TCGCTCGTTC TGCTGGTGCT
TACGTTCAGG TAGTAGCTCG TGACGGCGAA TACGCCACTC TGCGTCTGCG CTCCGGCGAA
ATGCGCAAAG TGCCTGTAGA CTGCCGCGCT ACTCTGGGCG AAGTGGGTAA TGCCGAACAC
ATGCTGCGTC AGCTGGGTAA AGCTGGTGCC AAGCGTTGGA GAGGTGTACG CCCAACAGTT
CGTGGTGTTG CCATGAACCC AGTAGATCAC CCACACGGTG GTGGTGAAGG CCGTACTTCT
GGTGGCCGTC ACCCAGTAAC TCCTTGGGGT GTTCCAACCA AGGGTTACAA GACTCGCAGC
AACAAACGCA CCGACAAGTA CATTGTACGT CGTCGTACTA AGTAA
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| Protein sequence | MAIVKCKPTS PGRRGVVKIV NSDLHKGKPF AGLLAKKSKT GGRNNTGRIT TRHVGGGHKQ
HYRLIDFKRN KDGIPGKIER LEYDPNRTAN IALVLYADGE RRYILAAKGM QAGDKVVSGI
DADIKVGNAL PLRNIPVGSV VHAVEMKPGK GAQIARSAGA YVQVVARDGE YATLRLRSGE
MRKVPVDCRA TLGEVGNAEH MLRQLGKAGA KRWRGVRPTV RGVAMNPVDH PHGGGEGRTS
GGRHPVTPWG VPTKGYKTRS NKRTDKYIVR RRTK
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