| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0204 |
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| Symbol | rplJ |
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| ID | 4602460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 237486 |
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| End bp | 237986 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639779525 |
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| Product | 50S ribosomal protein L10 |
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| Protein accession | YP_926085 |
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| Protein GI | 119773345 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0244] Ribosomal protein L10 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000122994 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000100039 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCATTAA GACTCGAAGA CAAAAAAGCG ATTGTTGCTG AAGTCAACGA AGCTGCCAAA
GGTGCACTGT CTGCAGTAGT TGCCGATTCT CGCGGTGTTA CTGTAGGCGC CATGACCACT
CTGCGTAAAA CTGCTCGCGC CAACGGCGTG TACGTACGTG TAGTACGTAA CACTCTGGCT
CGTCGTGCAG TTGAAGGTAC TGCTTTTGAG TGCCTGAACG AAGTGTTCAC TGGCCCAACT
TTGATTGCTT TCTCTAACGA GCACCCAGGT GCCGCCGCAC GTCTGCTGAA AGACTTCGCG
AAAGAGCAAG CCAAATTCGA AGTTAAAGGT GCAGCTTTCG AAGGGAACTT CATCCCTGCA
GCTGACATTG ATCGTTTGGC AAAACTGCCA ACTTACGAAG AAGCACTGGC ACAGCTGATG
ATGACTATGA AGGAAGCATC TGCTGGCAAG TTCGTTCGTA CACTGGCTGC ACTGCGCGAT
CAAAAACAAG AAGCCGCTTA A
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| Protein sequence | MALRLEDKKA IVAEVNEAAK GALSAVVADS RGVTVGAMTT LRKTARANGV YVRVVRNTLA
RRAVEGTAFE CLNEVFTGPT LIAFSNEHPG AAARLLKDFA KEQAKFEVKG AAFEGNFIPA
ADIDRLAKLP TYEEALAQLM MTMKEASAGK FVRTLAALRD QKQEAA
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