| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0203 |
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| Symbol | |
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| ID | 4602459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 236531 |
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| End bp | 237232 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639779524 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_926084 |
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| Protein GI | 119773344 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000988854 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00010102 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTAAGC TGACTAAACG CATGCGCGTA ATCCGCGAGA AAGTGGACGC TACCAAAGCT
TACGACATCA ACGAAGCTAT CACTCTGCTG AAAGAATTGG CCACTGCCAA GTTCGTTGAG
AGCGTAGACG TTGCTGTAAA CCTGGGCGTA GACCCACGTA AATCTGACCA AAACGTTCGT
GGCGCTATCG TTCTGCCACA CGGTACTGGT CGTGACGTAC GTGTAGCTGT GTTCACCCAG
GGTGCCAACG CTGAAGCCGC TAAAGAAGCT GGTGCTGAGC TGGTTGGTAT GGAAGATCTG
GCTGAGCAGG TGAAAGCCGG CGAAATGAAC TTCGACGTAG TTATTGCTTC TCCAGATGCA
ATGCGCGTTG TAGGTATGCT GGGTCAAATC CTCGGCCCAC GTGGTCTGAT GCCTAACCCT
AAGACTGGCA CTGTAACTCC TAACGTTGCT GAAGCCGTTA AGAACGCCAA AGCTGGTCAG
GTTCGCTATC GCAACGACAA GAACGGTATC ATCCACACCA CTATCGGTAA GGTTGATTTC
GATTCTGTTA AGCTGAAAGA AAACCTGGAA GCTCTGCTGG TTGCTCTGAA GAAGCAAAAG
CCAGCCGCTG CCAAGGGCCA GTACGTTAAG AAAGTGAGCA TTTCCACCAC CATGGGTGCC
GGTGTTGCTG TTGACCAGAA CACCTTGGAA GCCACTGCTT AA
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| Protein sequence | MAKLTKRMRV IREKVDATKA YDINEAITLL KELATAKFVE SVDVAVNLGV DPRKSDQNVR
GAIVLPHGTG RDVRVAVFTQ GANAEAAKEA GAELVGMEDL AEQVKAGEMN FDVVIASPDA
MRVVGMLGQI LGPRGLMPNP KTGTVTPNVA EAVKNAKAGQ VRYRNDKNGI IHTTIGKVDF
DSVKLKENLE ALLVALKKQK PAAAKGQYVK KVSISTTMGA GVAVDQNTLE ATA
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