| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0196 |
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| Symbol | murB |
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| ID | 4605911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 229927 |
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| End bp | 230940 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639779513 |
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| Product | UDP-N-acetylenolpyruvoylglucosamine reductase |
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| Protein accession | YP_926077 |
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| Protein GI | 119773337 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0812] UDP-N-acetylmuramate dehydrogenase |
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| TIGRFAM ID | [TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0144709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000886191 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCTGTTT CTCTCAAGTC CTACAACACC TTTGGTATCG ATCATCATTG CGCTGAGCTT
ATCGAAATAG CTGACGCAGC TGAGTTGCCA GCAATTATCC GTACCCTGGA CGAGCGTGAT
CAGTCTTACT TTATCCTCGG TGGTGGCAGC AATGTGGTAC TGACATCGGA TCTCGATACC
ACAGTGCTGA GAATGGTAAA TAAAGGAATT GAGGTAGCTG AGGACGATGC TTCCTGGCAT
TTAAGTGTGG CCGCCGGCGA AAACTGGCAT CAATTGGTGA GCTGGACCCT TGAAAACCAG
ATGCCGGGAC TTGAGAATCT GGCGCTTATT CCGGGTACTG TTGGCGCGGC TCCCATCCAG
AACATAGGCG CCTACGGTGT TGAGCTGATG GATATCTGCG AGTGGGTTGA GTATTTGTCG
CTGCCAGATT GCGTGACTGT CAGGCTGACC GCCGCAGAGT GCCGGTTCGA CTACCGTGAT
TCCATTTTTA AACACGATCT TAAGGGTAAA GCGATTATTA CCCGGGTCGG TTTCAACTTA
CCTAAGATGT GGCAACCTAA GCTCAATTAC GGCCCGCTGG CAGAGTTTGA TACAGATACT
GTGACGCCCG AGATGATCTA CGAGCGTGTG ATTGCAGTGC GTTCAGAGAA GCTGCCCGAT
CCTGCCAAAT TAGGTAACGC TGGCAGCTTT TTCAAGAATC CTATCATTGA TGCAGCATCC
TTTGCCGCCA TCGTAAAACA GTATCCGGAC GCTGTGGCCT ATGCCCTGGA AGATGGCCGA
ATGAAACTGG CTGCCGGCTG GCTTATTGAT AAGGCTGGCT TAAAAGGCTT TCGTCTTGGC
GACGCCGGGG TACATGATAA ACAGGCGTTG GTGCTGGTTA ATTTCGGCGC TGCCACTGGT
AAAGATATCC TGAAGCTCGC CAAACATGTC ATCAATGAGG TGCATACGCG CTTTGGTGTG
CAGCTTGAAC CTGAGCCCAA TGTGATGGGT CGATTATCAC TCTTAACCGA ATAA
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| Protein sequence | MPVSLKSYNT FGIDHHCAEL IEIADAAELP AIIRTLDERD QSYFILGGGS NVVLTSDLDT
TVLRMVNKGI EVAEDDASWH LSVAAGENWH QLVSWTLENQ MPGLENLALI PGTVGAAPIQ
NIGAYGVELM DICEWVEYLS LPDCVTVRLT AAECRFDYRD SIFKHDLKGK AIITRVGFNL
PKMWQPKLNY GPLAEFDTDT VTPEMIYERV IAVRSEKLPD PAKLGNAGSF FKNPIIDAAS
FAAIVKQYPD AVAYALEDGR MKLAAGWLID KAGLKGFRLG DAGVHDKQAL VLVNFGAATG
KDILKLAKHV INEVHTRFGV QLEPEPNVMG RLSLLTE
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