Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0190 |
Symbol | |
ID | 4602446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 218255 |
End bp | 219313 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639779501 |
Product | selenophosphate synthetase |
Protein accession | YP_926071 |
Protein GI | 119773331 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0709] Selenophosphate synthase |
TIGRFAM ID | [TIGR00476] selenium donor protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0742475 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCGC AACTTTCACA GCCCATCAAA CTGACCGAAT ACAGCCACGG AGCCGGTTGT GGCTGCAAAA TATCGCCCAA GGTACTGGGT ACCATCCTTG AATCGCAGCT GCCAAGCTTT GTTGACCCCA ATCTATTGGT TGGCAATGCC AGCCGCGATG ACGCAGCCGT TTACAAGCTG AATGACACCA CCGGCATCAT CAGCACCACC GACTTTTTCA TGCCCATAGT GGACGACCCC TTCACCTTCG GCCGTATCGC TGCCACCAAT GCCATCAGCG ATATCTACGC TATGGGCGGC ACCCCCATGA TGGCGATTGC CATTCTGGGT TGGCCTGTGA ACAAGCTGCC CGCCGAAGTG GCTCAACAGG TGGTGGATGG TGGCCGTCAG GCCTGTATGG ATGCCGGAAT CATGCTCGCC GGTGGCCACA GCATTGATGC GCCCGAGCCT ATTTTCGGTC TGGCCGTGAC TGGTCAGCTA CCGCTGGAGC GCCTGAAACA AAACAATACT GCCAAGGCGG GTGACAAGCT GTACCTCACC AAGCCCATCG GCATTGGTAT TCTCACGACG GCCCAAAAGC AGAAAAAGCT TGAAGACGCC GATGCCCACA TAGCCCCCGA AGCTATGTGC ACGCTCAATA AAATTGGCGC CGATATAGCA ACTCTGCCCG GCGTCAGTGC CATGACAGAT GTAACGGGTT TTGGATTGGC GGGGCACCTG CTGGAAATGT GTCAGGGCGC CACTGTGGAT GCCGAACTGA ACCTTGAGGC AGTTCCACTG CTGGAGCGCG CCGAGCATTA TCTTGACCTT GGCTGTATAC CCGGCGGCAC CCACAGAAAC TTTGACAGCT ACGGCGAGCA TCTGCCAAAC GTCAGCGAGC GCGAAAAGGC GCTGCTTTGT GACCCACAAA CCAGCGGCGG CCTTCTGGTG GCAGTCTGCG ATGAGGCCGA AGCGGCCTTA TGCGAGCTCC TCAGCAGCCA CGGTATAACG CCTGTATGCA TTGGCGAGCT GAAGGCGGGC CCGGGTAGAC TGCTTCTCAA ATCCGGTGGT TTGGCATGA
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Protein sequence | MSSQLSQPIK LTEYSHGAGC GCKISPKVLG TILESQLPSF VDPNLLVGNA SRDDAAVYKL NDTTGIISTT DFFMPIVDDP FTFGRIAATN AISDIYAMGG TPMMAIAILG WPVNKLPAEV AQQVVDGGRQ ACMDAGIMLA GGHSIDAPEP IFGLAVTGQL PLERLKQNNT AKAGDKLYLT KPIGIGILTT AQKQKKLEDA DAHIAPEAMC TLNKIGADIA TLPGVSAMTD VTGFGLAGHL LEMCQGATVD AELNLEAVPL LERAEHYLDL GCIPGGTHRN FDSYGEHLPN VSEREKALLC DPQTSGGLLV AVCDEAEAAL CELLSSHGIT PVCIGELKAG PGRLLLKSGG LA
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