| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0189 |
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| Symbol | |
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| ID | 4602445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 217155 |
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| End bp | 218258 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639779500 |
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| Product | tRNA 2-selenouridine synthase |
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| Protein accession | YP_926070 |
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| Protein GI | 119773330 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2603] Predicted ATPase |
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| TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0697371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACCA ATACCGTCCC CGCCAAGCAA TATCGGGAGA TCTTCTTAAA AGGTCATCCC
ATTATGGATG TGCGCGCCCC CATCGAGTTC AGCAAGGGCG CTTTTCCCAA TGCGGTGAAT
CTGCCTCTGA TGACCGACAG CGAACGGCAA AAGGTGGGAA CCTGCTACAA AGAGCATGGC
CAGGAAGCAG CTATAGAGCT TGGCCACCAG CTGGTTGCCG GTAAGGTCAA AGCGAACCGA
GTCGATGCCT GGAAAGCCTT TTTCAGCGAG CATCCAGATG GTTTTCTGTA TTGCTTTCGT
GGCGGGTTGA GATCGCGCAT CACTCAAAGT TGGCTCAAAG AGGTCGGACT CGATATTCCC
TTTATCGAAG GCGGCTACAA AGCAATGCGC CAATTCTTGA TTGACGAGAT TGACACTGCG
CCAGGCAAAA GCGAAATGCT TATCCTCAGC GGCATTACCG GCAGCGGTAA AACTGACTTT
GTACGCCTTC GCAGTGAGTC GGTCGATCTG GAAGGCATCG CCAACCATCG GGGCTCCAGC
TTTGGTCGCC AGCACGAGGG GCAACCCAGT CAGATTGATT TTGAGAATCG GCTCGCCATC
GAACTGCTGC GTCATCAGGA GCGCGAACAA GCCAAACTGC TACTGGAAGA TGAAAGCTTC
CTCATTGGCC GCAATGCCAT CCCCAAGACC TTTTTCGAAA AGATGCAGCA GGCGCCGGTA
TTGGTGCTGA CTTCTACGCT CGAAGAACGT CTGCCTCGCC TGTTGGACGA TTACGTCCAC
AAGATGCACG CGGGTTATGT GGAACGTCTG GGTGAAGAGC AGGGCTTTAT CGCTTATCGT
GACTATCTGC TCGGCAGCCT CAAGGGCATC TACAAACGCC TTGGCGGTAA GCTGCATGCT
GAAATGACAG AGCTGATGAA CAAAGCACTG GCCACGGAGC AAAGCCGCAG GGATACCAGT
GCCCACCTGG ACTGGATATC ACTGCTGCTG GAAAGTTATT ACGACCCCAT GTACCACTAT
CAACTGGGCA AAAAAGCCGC CCGGGTGCGC TTTACCGGAA CTCACGCTGA AATGCACGAG
TATCTGAGTA GTCTCGGCAA ATAG
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| Protein sequence | MSTNTVPAKQ YREIFLKGHP IMDVRAPIEF SKGAFPNAVN LPLMTDSERQ KVGTCYKEHG
QEAAIELGHQ LVAGKVKANR VDAWKAFFSE HPDGFLYCFR GGLRSRITQS WLKEVGLDIP
FIEGGYKAMR QFLIDEIDTA PGKSEMLILS GITGSGKTDF VRLRSESVDL EGIANHRGSS
FGRQHEGQPS QIDFENRLAI ELLRHQEREQ AKLLLEDESF LIGRNAIPKT FFEKMQQAPV
LVLTSTLEER LPRLLDDYVH KMHAGYVERL GEEQGFIAYR DYLLGSLKGI YKRLGGKLHA
EMTELMNKAL ATEQSRRDTS AHLDWISLLL ESYYDPMYHY QLGKKAARVR FTGTHAEMHE
YLSSLGK
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